cluster # 5516

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Schistosoma mansoni
cluster # 5516 cluster # 5516 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5516#0 length = 596 sequences # 3

consensusID : consensus_5516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 596
fasta sequence

                              [CCAACTGTCCC-AGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAGCTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCTCCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGAGTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATG-CAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTTTTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT]

[+] EMBL CD162110             [CCAACTGTCCC AGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAGCTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCTCCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGAGTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATG CAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTTTTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT]
[+] EMBL CD161964             [ atACTGTCCCAAGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD111182             [                                                                                                                                                                                                                                               ggGTAGACTTGGTACCTATTCGCCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATGTAAAGCAGATTCTGCGAAGCGAGTTAAATGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTAGGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTCAATTTTTTCGTACTGTACGTGCTATTAAACCTGAAGCATCTCGACTCGAGTCTGC      ]




>consensus_5516#0
CCAACTGTCCCAGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAG
TTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAG
CTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCT
CCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGA
GTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACG
ACTGATAAATGCAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTC
CTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCT
GTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTC
GTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTT
TTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT

clustalw multiple alignements is not computed in this case