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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5516 cluster # 5516       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5516#0 length = 596 sequences # 3  

consensusID : consensus_5516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 596
fasta sequence
                              [CCAACTGTCCC-AGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAGCTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCTCCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGAGTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATG-CAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTTTTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT]

[+] EMBL CD162110             [CCAACTGTCCC AGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAGCTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCTCCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGAGTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATG CAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTTTTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT]
[+] EMBL CD161964             [ atACTGTCCCAAGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAGTTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD111182             [                                                                                                                                                                                                                                               ggGTAGACTTGGTACCTATTCGCCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACGACTGATAAATGTAAAGCAGATTCTGCGAAGCGAGTTAAATGATTTGAAGGCGGATGTTGTCCTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCTGTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTCGTCACTAAAGTCTTTAGGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTCAATTTTTTCGTACTGTACGTGCTATTAAACCTGAAGCATCTCGACTCGAGTCTGC      ]


>consensus_5516#0 CCAACTGTCCCAGGGGGCATGGGTAAAAAAATAAAGACAGGGAAAGCGAGGAAGGACAAG TTTTATTTTCTTGCAAAGGAAACTGGGTTCCGATCTAGAGCAGCATTTAAGTTGATCCAG CTAAATCGTCGCTTCAAGTTTTTAAATTCCTCCAAAGTTCTGATAGACCTATGTGCTGCT CCTGGAGGCTGGTTGCAAGTTGCGGCCAAGGAAATGCCAATGACTAGTCACATTATAGGA GTAGACTTGGTACCTATTCACCCTATTCCAAAAGTTAAGACGTTTGTTGCGGATATAACG ACTGATAAATGCAAGCAGATTCTGCGAAGCGAGTAAAACGATTTGAAGGCGGATGTTGTC CTACACGATGGTGCACCGAATGTGGGGGCTGCTTGGTCAATCGATGAATATACCCAAGCT GTACTTTCGCTCAATTCATTTGCGATTGCAACTGAGTTCCTACGCAGGGGTGGTTGGTTC GTCACTAAAGTCTTTACGAGTCGAGATTATGAACCTCTTAAGTGGGTTTTATCTTAATTT TTTTGCACTGTACGTGCTATAAAACCTGAAACATCTCGACTCGAGTCTGCGGAAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)