cluster # 5542

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Schistosoma mansoni
cluster # 5542 cluster # 5542 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5542#0 length = 391 sequences # 3

consensusID : consensus_5542#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 391
fasta sequence

                              [TGATGTAGCGACAGAAATATTTCCCAGTAGTGGTCAAATTATAACAAAGTTTAGTCATGAAAATACTGAATAGCAGACGATCTCTACAACAACAAAATTGATGAACAATTAAAACTCATCTGTTTGAGCTTATCATATCAGTACGTGCACTCAATTTAATATTACGATTGTTAACTATCTAATTAGAGTGTGATATGTAATCCTTCAGTTACCTAGAAGTTCCAAAGATTTTTCTACTGGTTGATTAGAAGAAATGGTTTTCATGTCTGTTCTGGCTTTCGAAGACATTTGAGAAATAATACTCGGAGACTCCCCAGCAACTGACAAATTAGCAAACAGCTATTTTTATATACAATGGGAAATGCGACGTTGATATCAATAATGCAGACCA]

[+] EMBL CD088650             [TGATGTAGCGACAGAAATATTTCCCAGTAGTGGTCAAATTATAACAAAGTTTAGTCATGAAAATACTGAATAGCAGACGATCTCTACAACAACAAAATTGATGAACAATTAAAACTCATCTGTTTGAGCTTATCATATCAGTACGTGCACTCAATTTAATATTACGATTGTTAACTATCTAATTAGAGTGTGATATGTAATCCTTCAGTTACCTAGAAGTTCCAAAGATTTTTCTACTGGTTGATTAGAAGAAATGGTTTTCATGTCTGTTCTGGCTTTCGAAGACATTTGAGAAATAATACTCGGAGACTCCCCAGCAACTGACAAATTAGCAAACAGCTATTTTTATATACAATGGGAAATGCGACGTTGATATCAATAATGCAGACC ]
[-] EMBL CD088705             [ GATGTAGCGACAGAAATATTTCCCAGTAGTGGTCAAATTATAACAAAGTTTAGTCATGAAAATACTGAATAGCAGACGATCTCTACAACAACAAAATTGATGAACAATTAAAACTCATCTGTTTGAGCTTATCATATCAGTACGTGCACTCAATTTAATATTACGATTGTTAACTATCTAATTAGAGTGTGATATGTAATCCTTCAGTTACCTAGAAGTTCCAAAGATTTTTCTACTGGTTGATTAGAAGAAATGGTTTTCATGTCTGTTCTGGCTTTCGAAGACATTTGAGAAATAATACTCGGAGACTCCCCAGCAACTGACAAATTAGCAAACAGCTATTTTTATATACAATGGGAAATGCGACGTTGATATCAATAATGCAGACCA]
[-] EMBL CD088600             [ GATGTAGCGACAGAAATATTTCCCAGTAGTGGTCAAATTATAACAAAGTTTAGTCATGAAAATACTGAATAGCAGACGATCTCTACAACAACAAAATTGATGTACAATTAAAACTCATCTGTTTGAGCTTGTCATATCAGTACGTGCACTCAATTTAATATTACGATTGTTAACTATCTAATTAGAGTGTGATATGTAATCCTTCAGTTACCTAGAAGTTCCAAAGATTTTTCTACTGGTTGATTAGAAGAAATGGTTTTCATGTCTGTTCTGGCTTTCGAAGACATTTGAGAAATAATACTCGGAGACTCCCCAGCAACTGACAAATTAGCAAACAGCTATTTTTATATACAATGGGAAATGCGACGTTGATATCAATAATGCAGACCA]




>consensus_5542#0
TGATGTAGCGACAGAAATATTTCCCAGTAGTGGTCAAATTATAACAAAGTTTAGTCATGA
AAATACTGAATAGCAGACGATCTCTACAACAACAAAATTGATGAACAATTAAAACTCATC
TGTTTGAGCTTATCATATCAGTACGTGCACTCAATTTAATATTACGATTGTTAACTATCT
AATTAGAGTGTGATATGTAATCCTTCAGTTACCTAGAAGTTCCAAAGATTTTTCTACTGG
TTGATTAGAAGAAATGGTTTTCATGTCTGTTCTGGCTTTCGAAGACATTTGAGAAATAAT
ACTCGGAGACTCCCCAGCAACTGACAAATTAGCAAACAGCTATTTTTATATACAATGGGA
AATGCGACGTTGATATCAATAATGCAGACCA

clustalw multiple alignements is not computed in this case