cluster # 5554

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Schistosoma mansoni
cluster # 5554 cluster # 5554 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5554#0 length = 592 sequences # 3

consensusID : consensus_5554#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 592
fasta sequence

                              [GCGTATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAAAGGAGAATAGTGGGTTTATTGTTAGAATCTACCATATCACTTTCACAGAAAATAAAGTCAGTTGTTACTCAACTCATTACTAAGAAACAGTGTGTACATAACCAAACAATGGAAAAACTTTTGAAGTAGAAAAGCTTTAAATAAAATATATTTTCTCAAAGAAAAAACGTTATTTTCGGGAGATATCGCATGAGGAACTTTATTTCTTTCTACACAAATTACTAGCGATATTCGGATAGGGAACTGGATGTTAGTCATAAGGACATAGTATTCAGAGCAGTACTAGATGTAGAGCTGGAATGAGCAGAATAATCCAAAGACTCTGAAG-ATGTGATAGCTTGTAATTGATCTGAAGTTTCAATTTGTGTGGACGAAACATGTTTTGCATCATTATCAATAAAATTTCCAGCTTTAGTTTCGGACAATGCTGGATACACAAAACTCATTTGTAAATCACGTCCATGAAACTGCGTAAACTGACGAATAGCTGCCTCGGCAAAATCACGAGTGCAAAACGTAACTTCCAGCACTAACTGAT]

[+] EMBL AI977603             [GCGTATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAAAGGAGAATAGTGGGTTTATTGTTAGAATCTACCATATCACTTTCACAGAAAATAAAGTCAGTTGTTACTCAACTCATTACTAAGAAACAGTGTGTACATAACCAAACAATGGAAAAACTTTTGAAGTAGAAAAGCTTTAAATAAAATATATTTTCTCAAAGAAAAAACGTTATTTTCGGGAGATATCGCATGAGGAACTTTATTTCTTTCTACACAAATTACTAGCGATATTCGGATAGGGAACTGGATGTTAGTCATAAGGACATAGTATTCAGAGCAGTACTAGATGTAGAGCTGGAATGAGCAGAATAATCCAAAGACTCTGAAG ATGTGATAGCTTGTAATTGATCTGAAGTTTCAATTTGTGTGGACGAAACATGTTTTGCATCATTATCAATAAAATTTCCAGCTATAGTTTCGGACAATGCTGGATACACAAAACTCATTTGTAAATCACGTCCATGAAACTGCGTAAACTGACGA                                                       ]
[+] EMBL AI394849             [                                   tttaaaTTTTTTTTGCAAAAGGAGAATAGTGGGTTTATTGTTAGAATCTACCATATCACTTTCACAGAAAATAAAGTCAGTTGTTACTCAACTCATTACTAAGAAACAGTGTGTACATAACCAAACAATGGAAAAACTTTTGAAGTAGAAAAGCTTTAAATAAAATATATTTTCTCAAAGAAAAAACGTTATTTTCGGGAGATATCGCATGAGGAACTTTATTTCTTTCTACACAAATTACTAGCGATATTCGGATAGGGAACTGGATGTTAGTCATAAGGACATAGTATTCAGAGCAGTACTAGATGTAGAGCTGGAATGAGCAGAATAATCCAAAGACTCTGAAG ATGTGATAGCTTGTAATTGATCTGAAGTTTCAATTTGTGTGGACGAAACATGTTTTGCATCATTATCAAT AGATTTCCAGCTTTAGTTTCGGACAATGCTGGATACACAAAACTCATTTGTAAATCACGTCCATGAAACTGCGTAAACTGACGAATAGCTGCCTCGGCAAAATCACGAGTGCAAAACGTAACTTCCAGCACT       ]
[+] EMBL BF936807             [                                                                                                                                                                                                                                                                           ACAAATTACTAGCGATATTCGGATAGGGACCTGGATGTTAGTCATAAGGACATAGTATTCAGAGCAGTACTAGATGTAGAGCTGGAATGAGCAGAATAATCCAAAGACTCTGAAGAATGTGATAGCTTGTAATTGATCTGAAG TTCAATTTGTGTGGACGAAACATGTTTTGCATCATTATCAATAAAATTTCCAGCTTTAGTTTCGGACAATGCTGGATACACAAAACTCATTTGTAAATCACGTCCATGAAACTGCGTAAACTGACGAATAGCTGCCTCGGCAAAATCACGAGTGCAAAACGTAACTTCCAGCACTAACTGAT]




>consensus_5554#0
GCGTATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAAAGGAGA
ATAGTGGGTTTATTGTTAGAATCTACCATATCACTTTCACAGAAAATAAAGTCAGTTGTT
ACTCAACTCATTACTAAGAAACAGTGTGTACATAACCAAACAATGGAAAAACTTTTGAAG
TAGAAAAGCTTTAAATAAAATATATTTTCTCAAAGAAAAAACGTTATTTTCGGGAGATAT
CGCATGAGGAACTTTATTTCTTTCTACACAAATTACTAGCGATATTCGGATAGGGAACTG
GATGTTAGTCATAAGGACATAGTATTCAGAGCAGTACTAGATGTAGAGCTGGAATGAGCA
GAATAATCCAAAGACTCTGAAGATGTGATAGCTTGTAATTGATCTGAAGTTTCAATTTGT
GTGGACGAAACATGTTTTGCATCATTATCAATAAAATTTCCAGCTTTAGTTTCGGACAAT
GCTGGATACACAAAACTCATTTGTAAATCACGTCCATGAAACTGCGTAAACTGACGAATA
GCTGCCTCGGCAAAATCACGAGTGCAAAACGTAACTTCCAGCACTAACTGAT

clustalw multiple alignements is not computed in this case