Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5658 cluster # 5658       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5658#0 length = 268 sequences # 3  

consensusID : consensus_5658#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 268
fasta sequence
                              [GTGTAAAATTAATTTATTCTACCATAATATTGTTTACATACATACGTACACATACACAATAAATTAATCCACTATCAGTAAACAATACAAAAGTAAACCGAATACCTTAGTGATAAATTAAAAGAATCTGAAGAGA-GGGGAGACCAAAACTACAGTATTAACCAAATAATTTAATGCATAAAAACATACAAAAAAAGAAAAGAGAGGGGTGATTAGGGGAAAAAAACAAAAAAGGTCGGAGAATACTCCCCCTCTTACTTTTTATATA]

[+] EMBL CD074033             [GTGTAAAATTAATTTATTCTACCATAATATTGTTTACATACATACGTACACATACACAATAAATTAATCCACTATCAGTAAACAATACAAAAGTAAACCGAATACCTTAGTGATAAATTAAAAGAATCTGAAGAGA GGGGAGACCAAAACTACAGTATTAACCAAATAATTTAATGCATAAAAACATACAAAAAAAGAAAAGAGAGGGGTG                                                         ]
[-] EMBL CD079776             [ TGTAAA  TAATTTATTCTACCATAATA TGTTTACATACATACGTACACATACNCAATAAATTAATCCACTATCAGTAAACAATACAAAAGTAAACCGAATACCTTAGTGATAAATTAAAAGAATCTGAAGAGA GGGGAGACCANAACTACAGTATTAACCAAATAATTTAATGCATAAAAACATACAAAAAAAGAAAAGAGAGGGGTGA                                                        ]
[+] EMBL AW146498             [           ATTTATTCTACCATAATATTGTTTACATACATACGTACACATACACAATAAATTAATCCACTATCAGTAAACAATACAAAAGTAAACCGAATACCTTAGTGATAAATTAAAAGAATCTGAAGAGAGGGGGAGACCAAAACTACAGTATTTACCAAAT ATTTTATGCAT AAAACCTCCAAAAAAGGAAAGGGGGGGGGTTTTTAGGGGAAAAAAACAAAAAAGGTCGGAGAATACTCCCCCTCTTACTTTTTATATA]


>consensus_5658#0 GTGTAAAATTAATTTATTCTACCATAATATTGTTTACATACATACGTACACATACACAAT AAATTAATCCACTATCAGTAAACAATACAAAAGTAAACCGAATACCTTAGTGATAAATTA AAAGAATCTGAAGAGAGGGGAGACCAAAACTACAGTATTAACCAAATAATTTAATGCATA AAAACATACAAAAAAAGAAAAGAGAGGGGTGATTAGGGGAAAAAAACAAAAAAGGTCGGA GAATACTCCCCCTCTTACTTTTTATATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)