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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5660 cluster # 5660       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5660#0 length = 401 sequences # 3  

consensusID : consensus_5660#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 401
fasta sequence
                              [TAAAACTGATTTAATCATAAAACATAAAGAATCTCCATCAAGATCATTAGA-TTTAGTGAGTTTTCGACGTTTCACATCAACAACTATACCAGATAGTAGTAGTAATAATAATAATAATGGGAAAATACATACAGGTACTAGTAATGGTACAACTAGTGTTAATTCAAGTGAAAATAATCGTAATTCATTCATCCAGGAATCTGATATTTCGGCAACCATTGGTACTGCTGATGCTACTGTTAATGACAATTTGTTATCTATTAATCCCACACAAGATCATCATTCGAATACATCAACTAGTTTTCATAGTAGTATTCATCAAGTTTGGCAAGATCCATTACAAGAATTAGCTAGATTAACTGGAGCTGGTTCAAAACGTAATGCTTTA-TTACGTGGGTGTC]

[+] EMBL CD120454             [TAAAACTGATTTAATCATAAAACATAAAGAATCTCCATCAAGATCATTAGA TTTAGTGAGTTTTCGACGTTTCACATCAACAATTATACCAGATAGTAGTAGTAATAATAATAATAATGGGAAAATACATACAGGTACTAGTAATGGTACAACTAGTGTTAATTCAAGTGAAAATAATCGTAATTCATTCATCCAGGAATCTGATATTTCGGCAACCATTGGTACTGCTGATGCTACTGTTAATGACAATTTGTTATCTATTAATCCCACACAAGATCATCATTCGAATACATCAACTAGTTTTCATAGTAGTATTCATCAAGTTTGGCAAGATCCATTACAAGAATTAGCTAGATTAACTGGAGCTGGTTCAAAACGTAATGCTTTA TTACGTGGGTGT ]
[+] EMBL CD120071             [TAAAACTGATTTAATCATAAAACATAAAGAATCTCCATCAAGATCATTAGA TTTAGTGAGTTTTCGACGTTTCACATCAACAACTATACCAGATAGTAGTATTAATAATAATAATAATGGGAAAATACATACAGGTACTAGTAATGGTACAACTAGTGTTATTTCAAGTGAAAATAATCGTAATTCATTCATCCAGGAATCTGATATTTCGGCAACCATTGGTACTGCTGATGCTACTGTTAATGACAATTTGTTATCTATTAATCCCACACAAGATCATCATTCGAATACATCAACTAGTTTTCATAGTAGTATTCATCAAGTTTGGCAAGATCCATTACAAGAATTAGCTAGATTAACTGGAGCTGGTTC AAACGCAATGCTTTATTTACGT TGTGT ]
[-] EMBL CD120272             [  AAACTGA TTCATCATAAAACATAAAG ATCTTCATCCAGATCA TAGATTTTAGTGAGTTTTCGACGTTTCACATCAACAACTATCCCAGATAGTAGTAGTAAT NTATNAATAATGGGAAAATACATNCGGGTACTAGTAATGGTACANCTAGTGTTAATTCAAGTGAAAATAATCGTAATTCATTCATCCAGGAATCTGATATTTCGGCAACCATTGGTACTGCTGATGCTACTGTTAATGACAATTTGTTATCTATTAATCCCACACAAGATCATCATTCGAATACATCAACTAGTTTTCATAGTAGTATTCATCAAGTTTGGCAAGATCCATTACAAGAATTAGCTAGATTAACTGGAGCTGGTTCAAAACGTAATGCTTTA TTACGTTGGCGTC]


>consensus_5660#0 TAAAACTGATTTAATCATAAAACATAAAGAATCTCCATCAAGATCATTAGATTTAGTGAG TTTTCGACGTTTCACATCAACAACTATACCAGATAGTAGTAGTAATAATAATAATAATGG GAAAATACATACAGGTACTAGTAATGGTACAACTAGTGTTAATTCAAGTGAAAATAATCG TAATTCATTCATCCAGGAATCTGATATTTCGGCAACCATTGGTACTGCTGATGCTACTGT TAATGACAATTTGTTATCTATTAATCCCACACAAGATCATCATTCGAATACATCAACTAG TTTTCATAGTAGTATTCATCAAGTTTGGCAAGATCCATTACAAGAATTAGCTAGATTAAC TGGAGCTGGTTCAAAACGTAATGCTTTATTACGTGGGTGTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)