Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5739 cluster # 5739       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5739#0 length = 477 sequences # 3  
consensusID : consensus_5739#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 477
fasta sequence 
                              [CTAATGGTTTGCAACCTCGGCTCCTGTCTTTTAAAAGATAGCATCACCAGTGCACCATGTCACAATCAGTAATCTGTATTCACTCGGGTCTAAGGTTTGCTGCTTTCATGGTACCCCTACTGACCTTTACGACATAATGGAACCCCGTGGATTTCGGAAGAT-GGGGTTTTCTCACATAGTCACGACGAGAATACCTCACTGTTGAGCTGAATTGGGAATTATGATAAGCTATCTGGGATCACATCTTTATCATGTTGTTACTTTTGCCGTAGTGTCTTTGATTCTTATCCTATTGCGCTGTCACCCAATGCAGCTAGTTACACCCATACTTTACTTTTTGTTGTTTATACTTTGTATGACCATAAGTTATACATATTTTATTTGACCCACCTAAGAAAGCTAGCACGGTTGACACAAAGTTTTACTGTATTATACAGAATTTTCCACTGACAAAGCATTNTATTCGTTTGAACAGCC]

[-] EMBL CD128081             [CTAATGGTTTGCAACCTCGGCTCCTGTCTTTTAAAAGATAGCATCACCAGTGCACCATGTCACAATCAGTAATCTGTATTCACTCGGGTCTAAGGTTTGCTGCTTTCATGGTACCCCTACTGACCTTTACGACATAATGGAACCCCGTGGATTTCGGAAGATCGGGGTTTTCTCACA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD159707             [                                                               AATCAGTAATCTGTATTCACTCGGGTCTAAGGTTTGCTGCTTTCATGGTACCCCTACTGACCTTTACGACATAATGGAACCCCGTGGATTTCGGAAGAT GGGATTCAACCGGGTAGTCACGACGAGAATACCTCACTGTTGAGCTGAATTGGGAATTATGATAAGCTATCTGGGATCACATCTTTATCATGTTGTTACTTTTGCCGTAGTGTCTTTGATTCTTATCCTATTGCGCTGTCACCCAATGCAGCTAGTTACACCCATACTTTACTTTTTGTTGTTTATACTTTGTATGACCATAAGTTATACATATTTTATTTGACCCACCTAAGAAAGCTAGCACGGTTGACACAAAGTTTTACTGTATTATACAG                                        ]
[+] EMBL CD149520             [                                                                                                                                                                                                        TGTTGAGCTGAATTGGGAATTATGATAAGCTATCTGGGATCACATCTTTATCATGTTGTTACTTTTGCCGTAGTGTCTTTGATTCTTATCCTATTGCGCTGTCACCCAATGCAGCTAGTTACACCCATACTTTACTTTTTGTTGTTTATACTTTGTATGACCATAAGTTATACATATTTTATTTGACCCACCTAAGAAAGCTAGCACGGTTGACACAAAGTTTTACTGTATTATACAGAATTTTCCACTGACAAAGCATTNTATTCGTTTGAACAGCC]




>consensus_5739#0
CTAATGGTTTGCAACCTCGGCTCCTGTCTTTTAAAAGATAGCATCACCAGTGCACCATGT
CACAATCAGTAATCTGTATTCACTCGGGTCTAAGGTTTGCTGCTTTCATGGTACCCCTAC
TGACCTTTACGACATAATGGAACCCCGTGGATTTCGGAAGATGGGGTTTTCTCACATAGT
CACGACGAGAATACCTCACTGTTGAGCTGAATTGGGAATTATGATAAGCTATCTGGGATC
ACATCTTTATCATGTTGTTACTTTTGCCGTAGTGTCTTTGATTCTTATCCTATTGCGCTG
TCACCCAATGCAGCTAGTTACACCCATACTTTACTTTTTGTTGTTTATACTTTGTATGAC
CATAAGTTATACATATTTTATTTGACCCACCTAAGAAAGCTAGCACGGTTGACACAAAGT
TTTACTGTATTATACAGAATTTTCCACTGACAAAGCATTNTATTCGTTTGAACAGCC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)