cluster # 5740

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Schistosoma mansoni
cluster # 5740 cluster # 5740 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5740#0 length = 507 sequences # 3

consensusID : consensus_5740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 507
fasta sequence

                              [TACTAGATG-GCCG-TGTTAGTCGGCGCGCAAAGAATGATTTTATTTAATCTTTAATGTTGAGTGAATGATTGCGTCATATATCACATCGGATTTACCAGTTAACGTATGTGTATAATCTATGAACAATAGAGTAGTCTAGCTATACAGTTAAGAGTGGTGAAATATATGTGGTGGAATGGATGAGAACTCAAATACGTCCAGAGTATTTACAACCATTATCCTCCATCGATAAAGTATAT-AACTGTAACAAAATATAGGATTAATCTAAAAACAGATTTCAATACCTAAATAAAACTTGCCAAGAAGTTTTTATTCAGTTTCTAGAAGTTCTATTTATTAGAAAATTCATTCTTCTTTTATGTTTCGAAACAGCAGTTTGTACTCTCATCGAACTTCCCGTGATTATCCTTAACCATTGTTTAATGTCAAGTCTGACACCAATATTCGATATTTCTGTTTTTTTATTTTTATACTATCTCTTGCGCTCGTTTATATTTTTACCCATCA]

[+] EMBL CD113741             [TACTAGATG GCCG TGTTAGTCGGCGCGCAAAGAATGATTTTATTTAATCTTTAATGTTGAGTGAATGATTGCGTCATATATCACATCGGATTTACCAGTTAACGTATGTGTATAATCTATGAACAATAGAGTAGTCTAGCTATACAGTTAAGAGTGGTGAAATATATGTGGTGGAATGGATGAGAACTCAAATACGTCCAGAGTATTTACAACCATTATCCTCCATCGATAAAGTATAT AACTGTAACAAAATATAGGATTAATCTAAAAACAGATTTCAATACCTAAATAAAACTTGCCAAGAAGTTTTTATTCAGTTTCTAGAAGTTCTATTTATTAGAAAATTCATTCTTCTTTTATGTTTCGAAACAGCAGTTTGTACTCTCATCGAACTTCCCGTGATTATCCTTAACCATTGTTTAATGTCAAGTCTGACACCAATATTCGATATTTCTGTTTTTTTATTTTTATACTATCTCTTGCGCTCGTTTATATTTTTACCCATC ]
[+] EMBL CD113740             [     aATGCGCCGATGTAAGTCGGCGCGCAAAGAATGATTTTATTTAATCTTTAATGTTGAGTGAATGATTGCGTCATATATCACATCGGATTTACCAGTTAACGTATGTGTATAATCTATGAACAATAGAGTAGTCTAGCTATACAGTTAAGAGTGGTGAAATATATGTGGTGGAATGGATGAGAACTCAAATACGTCCAGAGTATTTACAACCATTATCCTCCATCGATAAAGTATATAAACTGTAACAAAATATAGGATTAATCTAAAAACAGATTTCAATACCTAAATAAAACTTGCCAAGAAGTTTTTATTCAGTTTCTAGAAGTTCTATTTATTAGAAAATTCATTCTTCTTTTATGTTTCGAAACAGCAGTTTGTACTCTCATCGAACTTCCCGTGATTATCCTTAACCATTGTTTAATGTCAAGTCTGACACCAATATTCGATATATCTGTATAATTATTTTTATACTATCTCTTGCGCTCGTATATATATTTACCCATC ]
[-] EMBL CD088071             [                                                                         CGTCATATATCACATCGGATTTACCAGTTAACGTATGTGTATAATCTATGAACAATAGAGTAGTCTAGCTATACAGTTAAGAGTGGTGAAATATATGTGGTGGAATGGATGAGAACTCAAATACGTCCAGAGTATTTACAACCATTATCCTCCATCGATAAAGTATAT AACTGTAACAAAATATAGGATTAATCTAAAAACAGATTTCAATACCTAAATAAAACTTGCCAAGAAGTTTTTATTCAGTTTCTAGAAGTTCTATTTATTAGAAAATTCATTCTTCTTTTATGTTTCGAAACAGCAGTTTGTACTCTCATCGAACTTCCCGTGATTATCCTTAACCATTGTTTAATGTCAAGTCTGACACCAATATTCGATATTTCTGTTTTTTTATTTTTATACTATCTCTTGCGCTCG TTATATTTTTACCCATCA]




>consensus_5740#0
TACTAGATGGCCGTGTTAGTCGGCGCGCAAAGAATGATTTTATTTAATCTTTAATGTTGA
GTGAATGATTGCGTCATATATCACATCGGATTTACCAGTTAACGTATGTGTATAATCTAT
GAACAATAGAGTAGTCTAGCTATACAGTTAAGAGTGGTGAAATATATGTGGTGGAATGGA
TGAGAACTCAAATACGTCCAGAGTATTTACAACCATTATCCTCCATCGATAAAGTATATA
ACTGTAACAAAATATAGGATTAATCTAAAAACAGATTTCAATACCTAAATAAAACTTGCC
AAGAAGTTTTTATTCAGTTTCTAGAAGTTCTATTTATTAGAAAATTCATTCTTCTTTTAT
GTTTCGAAACAGCAGTTTGTACTCTCATCGAACTTCCCGTGATTATCCTTAACCATTGTT
TAATGTCAAGTCTGACACCAATATTCGATATTTCTGTTTTTTTATTTTTATACTATCTCT
TGCGCTCGTTTATATTTTTACCCATCA

clustalw multiple alignements is not computed in this case