Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5752 cluster # 5752       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5752#0 length = 694 sequences # 3  

consensusID : consensus_5752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 694
fasta sequence
                              [GTACCCCGAAGACCAAAGGTAGGTTTAGGCTCCGCTGTTCAATCGTCGTGCGATCGATCGTATTCGTGAACTTGAAGAAATAAACGCACAATTAAACACTGAGCTAATGGCTTTCCGTTCGTCCAATGCCTCGAACGTATCCTACGTTGATTCTAATAAAAGTACATCGGAAAATGAGTTACTATCATTTGATACATCACCATCTGTAGACAATCAAAAAATGAATGATTATTATCATCAGTGTAAAACTTCACAAAGTTTTTCCAGTGAATGTATACCATCATCAATTGACCAAGTATTTCATTTCACAGGTAAATCTATTCAACCGACAAATTTATCACCGTATAATTCAAATGGCAAAGAAGTATCAATAAAAAGAATGAAAGAATATTCTAATTCATTCCATTCATCGTCATTATCTTCTGCATCATCATCTTCATTATCATCACCGCCATCAATTAATTCACCGCCTAATTTCCAATCAAATAATGATATTAAATTTATTACTAATTCGCAATATTCTTCTGTCTCACCATCATCATTGTCATCATCATCACCACCACTAGGAATATCCAACGGCGTTGTCATTCCATCATTTATTGTACAACATCATGATTTATATGATAATAATTGTATTGATACTGAGAACTTACCAACTCGTCAACAATATCAATACCATCATCCATTATCATCG]

[+] EMBL CD127939             [GTACCCCGAAGACCAAAGGTAGGTTTAGGCTCCGCTGTTCAATCGTCGTGCGATCGATCGTATTCGTGAACTTGAAGAAATAAACGCACAATTAAACACTGAGCTAATGGCTTTCCGTTCGTCCAATGCCTCGAACGTATCCTACGTTGATTCTAATAAAAGTACATCGGAAAATGAGTTACTATCATTTGATACATCACCATCTGTAGACAATCAAAAAATGAATGATTATTATCATCAGTGTAAAACTTCACAAAGTTTTTCCAGTGAATGTATACCATCATCAATTGACCAAGTATTTCATTTCACAGGTAAATCTATTCAACCGACAAATTTATCACCGTATAATTCAAATGGCAAAGAAGTATCAATAAAAAGAATGAAAGAATATTCTAATTCATTCCATTCATCGTCATTATCTTCTGCATCATCATCTTCATTATCATCACCGCCAT                                                                                                                                                                                                                                               ]
[-] EMBL CD128137             [                                  CTGTTCAATCGTCGTGCGATCGATCGTATTCGTGAACTTGAAGAAATAAACGCACAATTAAACACTGAGCTAATGGCTTTCCGTTCGTCCAATGCCTCGAACGTATCCTACGTTGATTCTAATAAAAGTACATCGGAAAATGAGTTACTATCATTTGATACATCACCATCTGTAGACAATCAAAAAATGAATGATTATTATCATCAGTGTAAAACTTCACAAAGTTTTTCCAGTGAATGTATACCATCATCAATTGACCAAGTATTTCATTTCACAGGTAAATCTATTCAACCGACAAATTTATCACCGTATAATTCAAATGGCAAAGAAGTATCAATAAAAAGAATGAAAGAATATTCTAATTCATTCCATTCATCGTCATTATCTTCTGCATCATCATCTTCATTATCATCACCGCCATC                                                                                                                                                                                                                                              ]
[+] EMBL CD167748             [                                                               TCGTGAACTTGAAGAAATAAACGCACGATTAAACACTGAGCTAATGGCTTTCCGTTCGTCCAATGCCTCGAACGTATCCTACGTTGATTCTAATAAAAGTACATCGGAAAATGAGTTACTATCATTTGATACATCACCATCTGTAGACAATCAAAAAATGAATGATTATTATCATCAGTGT AAACTTCACAAAGTTTTTCCAGTGAATGTATACCATCATCAATTGACCAAGTATTTCATTTCACAGGTAAATCTATTCAACCGACAAGTTTATCACCGTATAATTCAAATGGCAAAGAAGTATCAATAAAAAGAATGAAAGAATATTCTAATTCATTCCATTCATCGTCATTATCTTCTGCATCATCATCTTCATTATCATCACCGCCATCAATTAATTCACCGCCTAATTTCCAATCAAATAATGATATTAAATTTATTACTAATTCGCAATATTCTTCTGTCTCACCATCATCATTGTCATCATCATCACCACCACTAGGAATATCCAACGGCGTTGTCATTCCATCATTTATTGTACAACATCATGATTTATATGATAATAATTGTATTGATACTGAGAACTTACCAACTCGTCAACAATATCAATACCATCATCCATTATCATCG]


>consensus_5752#0 GTACCCCGAAGACCAAAGGTAGGTTTAGGCTCCGCTGTTCAATCGTCGTGCGATCGATCG TATTCGTGAACTTGAAGAAATAAACGCACAATTAAACACTGAGCTAATGGCTTTCCGTTC GTCCAATGCCTCGAACGTATCCTACGTTGATTCTAATAAAAGTACATCGGAAAATGAGTT ACTATCATTTGATACATCACCATCTGTAGACAATCAAAAAATGAATGATTATTATCATCA GTGTAAAACTTCACAAAGTTTTTCCAGTGAATGTATACCATCATCAATTGACCAAGTATT TCATTTCACAGGTAAATCTATTCAACCGACAAATTTATCACCGTATAATTCAAATGGCAA AGAAGTATCAATAAAAAGAATGAAAGAATATTCTAATTCATTCCATTCATCGTCATTATC TTCTGCATCATCATCTTCATTATCATCACCGCCATCAATTAATTCACCGCCTAATTTCCA ATCAAATAATGATATTAAATTTATTACTAATTCGCAATATTCTTCTGTCTCACCATCATC ATTGTCATCATCATCACCACCACTAGGAATATCCAACGGCGTTGTCATTCCATCATTTAT TGTACAACATCATGATTTATATGATAATAATTGTATTGATACTGAGAACTTACCAACTCG TCAACAATATCAATACCATCATCCATTATCATCG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)