cluster # 5782

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Schistosoma mansoni
cluster # 5782 cluster # 5782 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5782#0 length = 644 sequences # 3

consensusID : consensus_5782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 644
fasta sequence

                              [AAATTTTTGACTAGCAATATTTCATTGTGGAATCAAGTAAGTCAATTTTGTTCTATATAGGACTATAAACATCTTACTTCACTTATTTTCTGTAAAGGATATCCTTATAATTAGTTTTCTTTAGTTAATTTACTGTAGATAAGTTTATTACTCTACTAAAAAGCAACTTGACTAAATCAAGTAGTTGAAGCTACGTTCAACTGAAGCATCCTTCGTATAAATATTTTGTTCACTATTATCATGATTTATTTTTATAATGAAATCAACAATTGAATATTGTGGATATGGAGCACTTTAAGTTCAATGATGAAATATCCATAGTCAAAATTAATAAGTAGTTTTGTCATCAACGTATCCCAATTAATACCACATTCTTCTGGCTACTGAAAACAAATATGCATATTGACGATAGTCTGAAAATACGAAACAGAATACAATCCAAGTGACAAACTTATGATTGTTTCATATCTTCTTTCTGTAAAGATGTGTGTAGAGTTGATAATAAACATTTCTTCAAAGTAGTGGTAAATATCACATCTGAATTGACTGAAATAGTTTAAAGACCAATTCATTAACAATATTGTTCCATTCACT-TATATAATATATATAAATATACATTCTGAAAGTAATTATTACAGAATTCA]

[+] EMBL CD096419             [AAATTTTTGACTAGCAATATTTCATTGTGGAATCAAGTAAGTCAATTTTGTTCTATATAGGACTATAAACATCTTACTTCACTTATTTTCTGTAAAGGATATCCTTATAATTAGTTTTCTTTAGTTAATTTACTGTAGATAAGTTTATTACTCTACTAAAAAGCAACTTGACTAAATCAAGTAGTTGAAGCTACGTTCAACTGAAGCATCCTTCGTATAAATATTTTGTTCACTATTATCATGATTTATTTTTATAATGAAATCAACAATTGAATATTGTGGATATGGAGCACTTTAAGTTCAATGATGAAATATCCATAGTCAAAATTAATAAGTAGTTTTGTCATCAACGTATCCCAATTAATACCACATTCTTCTGGCTACTGAAAACAAATATGCATATTGACGATAGTCTGAAAATACGAAACAGAATACAATCCAAGTGACAAACTTATGATTGTTTCATATCTTCTTTCTGTAAAGATGTGTGTAGAGTTGATAATANACATTTCTTCANAGTAGTGGTAAATATCACATCTGAATTGACTGANATAGTTTAAAGACCAATTCATTAACAATATTGGTCCATTCACT TATATAATATATATA                                   ]
[-] EMBL CD096440             [                                                                                                 GATATCCTTATAATTAGTTTTCTTTAGTTAATTTACTGTAGATAAGTGTATTACTCTACTAAAAAGCAACTTGACTAAATCAAGTAGTTGAAGCTACGTTCAACTGAAGCATCCTTCGTATAAATATTTTGTTCACTATTATCATGATTTATTTTTATAATGAAATCAACAGTTGAATATTGTGGATATGGAGCACTTTAAGTTCAATGATGAAATATCCATAGTCAAAATTAATAAGTAGTTTTGTCATCAACGTATCCCAATTAATACCACATTCTTCTGGCTACTGAAAACAAATATGCATATTGACGATAGTCTGAAAATACGAAACAGAATACAATCCAAGTGACAAACTTATGATTGTTTCATATCTTCTTTCTGTAAAGATGTGTGTAGAGTTGATAATAAACATTTCTTCAAAGTAGTGGTAAATATCACATCTGAATTGACTGAAATAGTTTAAAGACCAATTCATTAACAATATTGTTCCATTCACT TATATAATATATATAAATATACATTCTGAAAGTAATTATTACAGAATTCA]
[-] EMBL CD096443             [                                                                                                                                                                                                                                                                                                                                                                                                                                AAAATGCGAAACAGAATACAATCCAAGTGACAAACTTATGATTGTTTCATATCTTCTTTCTGTAAAGATGTGTGTAGAGTTGATAATAAACATTTCTTCAAAGTAGTGGTAAATATCACATCTGAATTGACTGAAATAGTTTAAAGACCAATTCATTAACAATATTGTTCCATTCACTGTATATAATAGATATAAATATACATTCTGAAAGTAATTA TACAGAATT  ]




>consensus_5782#0
AAATTTTTGACTAGCAATATTTCATTGTGGAATCAAGTAAGTCAATTTTGTTCTATATAG
GACTATAAACATCTTACTTCACTTATTTTCTGTAAAGGATATCCTTATAATTAGTTTTCT
TTAGTTAATTTACTGTAGATAAGTTTATTACTCTACTAAAAAGCAACTTGACTAAATCAA
GTAGTTGAAGCTACGTTCAACTGAAGCATCCTTCGTATAAATATTTTGTTCACTATTATC
ATGATTTATTTTTATAATGAAATCAACAATTGAATATTGTGGATATGGAGCACTTTAAGT
TCAATGATGAAATATCCATAGTCAAAATTAATAAGTAGTTTTGTCATCAACGTATCCCAA
TTAATACCACATTCTTCTGGCTACTGAAAACAAATATGCATATTGACGATAGTCTGAAAA
TACGAAACAGAATACAATCCAAGTGACAAACTTATGATTGTTTCATATCTTCTTTCTGTA
AAGATGTGTGTAGAGTTGATAATAAACATTTCTTCAAAGTAGTGGTAAATATCACATCTG
AATTGACTGAAATAGTTTAAAGACCAATTCATTAACAATATTGTTCCATTCACTTATATA
ATATATATAAATATACATTCTGAAAGTAATTATTACAGAATTCA

clustalw multiple alignements is not computed in this case