cluster # 5872

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Schistosoma mansoni
cluster # 5872 cluster # 5872 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5872#0 length = 436 sequences # 3

consensusID : consensus_5872#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 436
fasta sequence

                              [CCAACTCACGTCCACCCATTATATGTTGTGTATCAAAAGCCAGATACACACCAAACAACAAGGCTGCGAGTCCACCATAAACGACTTGCAAAATCCAATTCGGTTTGGATACAGCAAAAACAATGACACAAGCAAGTCCAGTTAACATGACCACAATAGTTAATACAAATATTAATGAAGTACATTTTGTAATATCAATTCGTGTTTGTATAGCAAAAATAGAAATTGCTATAC-ATAGACAAGC-TGTTATAATAACAGCGATTAGAACAGATTGAGTATCATAAAATGATGTAATGGGACCAGCCATATAAGAAAATGCAAGTGTAAAAACAGATAAAGCGATAACGTTTCCAGGATATCGTCGTCTTACACTGGGACAACAAACCAATGCGATATAAGTGCACAAAAATGTAGCATAGGACAAATAATAAAACCA]

[+] EMBL CD188813             [CCAACTCACGTCCACCCATTATATGTTGTGTATCAAAAGCCAGATACACACCAAACAACAAGGCTGCGAGTCCACCATAAACGACTTGCAAAATCCAATTCGGTTTGGATACAGCAAAAACAATGACACAAGCAAGTCCAGTTAACATGACCACAATAGTTAATACAAATATTAATGAAGTACATTTTGTAATATCAATTCGTGTTTGTATAGCAAAAATAGAAATTGCTATAC ATAGACAAGC TGTTATAATAACAGCGATTA                                                                                                                                                                            ]
[-] EMBL CD163857             [                                                                     GTCCACCATAAACGACTTGCAAAATCCAATTCGGTTTGGATACAGCAAAAACAATGACACAAGCAAGTCCAGTTAACATGACCACAATAGTTAATACAAATATTAATGAAGTACATTTTGTAATAT                                                                                                                                                                                                                                                   ]
[+] EMBL CD095299             [                                                                                                                                                       CACAATAGTTAATACAAATATTAATGAAGTACATTCTGTAATATCAATTCGTGTTTGTATAGCAAAAATAGAAATTGCTATACAATACACAAGCATGTTATAATAACAGCGATTAGAACAGATTGAGTATCATAAAATGATGTAATGGGACCAGCCATATAAGAAAATGCAAGTGTAAAAACAGATAAAGCGATAACGTTTCCAGGATATCGTCGTCTTACACTGGGACAACAAACCAATGCGATATAAGTGCACAAAAATGTAGCATAGGACAAATAATAAAACCA]




>consensus_5872#0
CCAACTCACGTCCACCCATTATATGTTGTGTATCAAAAGCCAGATACACACCAAACAACA
AGGCTGCGAGTCCACCATAAACGACTTGCAAAATCCAATTCGGTTTGGATACAGCAAAAA
CAATGACACAAGCAAGTCCAGTTAACATGACCACAATAGTTAATACAAATATTAATGAAG
TACATTTTGTAATATCAATTCGTGTTTGTATAGCAAAAATAGAAATTGCTATACATAGAC
AAGCTGTTATAATAACAGCGATTAGAACAGATTGAGTATCATAAAATGATGTAATGGGAC
CAGCCATATAAGAAAATGCAAGTGTAAAAACAGATAAAGCGATAACGTTTCCAGGATATC
GTCGTCTTACACTGGGACAACAAACCAATGCGATATAAGTGCACAAAAATGTAGCATAGG
ACAAATAATAAAACCA

clustalw multiple alignements is not computed in this case