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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5915 cluster # 5915       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5915#0 length = 949 sequences # 3  

consensusID : consensus_5915#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 949
fasta sequence
                              [CCCTCCGAGCCAANAATTCGGCACGAGGAGAACACAGGGATGCATTTTTTGATTGTCATAACATACCGGGAAACGATAAATTAATGCCTTCAGATAGTCAAAGCCTTCATAAATCAAAGGCTGAAATCAATCAACTTCTTTTGAACACATGTGGTGAATCGAATCAAATTCTGGATGCAAACAGTGATTCAGATCATATAGATTCTATGTTGGAAACGTTAAAACAACAATTGCTACTTCAGACAGCATCACCTGAGGAAGTTTGTAATCGTCGAAATCGTTGGTTAGAGATAACAAAATCAACTAAAGGGGTTACAAAGTGGTTAGGTTTCAGTGAGGTTTTCATGGTCTCTTCGTTTATAGGCGATGGGATAGACAAATTAAGGGACTTCCTTGTATCCAAAGCTATACCGACTCGTTCTTGGATCCTACCTCCAACAATGATAACCGATCAAGAACCAACTGAACTCATACGAATGTGTGTATGGTCACACTGTCTCAACAAACTACAACAGGAAATCCCATACTCGTTGCATATTATCGTAGATGATTGTGACAAAATTAAACTGGACAGTGGTGATGATCGAGTATACATTCACGTGCGCATACGGTGCAAAAATGAACGTCAGTTATTACGTGTTTTAGGTATGAAAGGGAAATACGAT-AAGGAGATTTCAAGCGCTGTTAAACTGGAGCTCATGACAATGTTCAGATGTAATACGGTTGTAAAATTAACTGCCGAGTTATTCAAAATCGACTCTAATATCAAAAAGAAGCTTCGCCGCACCCAAGATTTTTCCGAAGTTTTTCCAGTAAATGACAGATTGGAATAGTTTATTTTGGAGTTTGATTTGTAAATGCTTTGTTTTTCTTATCTTTTTAACTACGTTATTTCATTTTGTAACAACAGTTAATATCGATGAATTTGATTAAAATAGTTTCCGCCACT]

[+] EMBL CD080766             [CCCTCCGAGCCAANAATTCGGCACGAGGAGAACACAGGGATGCATTTTTTGATTGTCATAACATACCGGGAAACGATAAATTAATGCCTTCAGATAGTCAAAGCCTTCATAAATCAAAGGCTGAAATCAATCAACTTCTTTTGAACACATGTGGTGAATCGAATCAAATTCTGGATGCAAACAGTGATTCAGATCATATAGATTCTATGTTGGAAACGTTAAAACAACAATTGCTACTTCAGACAGCATCACCTGAGGAAGTTTGTAATCGTCGAAATCGTTGGTTAGAGATAACAAAATCAACTAAAGGGGTTACAAAGTGGTTAGGTTTCAGTGAGGTTTTCATGGTCTCTTCGTTTATAGGCGATGGGATAGACAAATTAAGGGACTTCCTTGTATCCAAAGCTATACCGACTCGTTCTTGGATCCTACCTCCAACAATGATAACCGATCAAGAACCAACTGAACTCATACGAATGTGTGTATGGTCACACTGTCTCAACAAACTACAACAGGAAATCCCATACTCGTTGCATATTATCGTAGATGATTGTGACAAAATTAAACTGGACAGTGGTGATGATCGAGTATACATTCACGTGCGCATACGGTGCANAAATGAACGTCAGTTATTACGTGTTTTAAGTATGAAAGGGAAATACGAT AAGGAGATTTCA                                                                                                                                                                                                                                                                                ]
[-] EMBL CD137168             [                                                                                                                         TGAAATCAATCATCTCTTTTTGAACACATGTGGTGAATCGAATCAAATTCTGGATGCAAACAGCGATTCAGATCATATAGATTCTATGTTGGGAACGTTACATCAACAATAGCTACTTCAGTCAGCATCACCTCAGGAAGTTAGTAATCGTCGAAATCGTTGGTTAGAGATAGCAACATCAACTAAAGGGGTTACAAAGTGGTTAGGTTTCAGTGAGGTTTTCATGGTCTCTTCGTTTATAGGCGATGGGATAGACAAATTAAGGGACTTCCTTGTATCCAAAGCTATACCGACTCGTTCTTGGATCGTACCTCCACCAATGATAGCCGATCAAGAACCAACTGAACTCATACGAATGTGTGTATGGTCACACTGTCTCAACAAACTACAACAGGAAATCCCATACTCGTTGCATATTATCGTAGATGATTGTGACAAAATTAAACTGGACAGTGGTGATGATCGAGTATACATTCACGTGCGCATACGGTGCAAAAATGAACGTCAGTTATTACGTGTTTTAGGTATGAAg                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD074690             [                                                                                                                                                                                                                                                                                                                                                                                      GACAAATTAAGGGAC TCCCTGTATCCAAAGCTATACCGACTCGTTCTTGGATCCTACCTCCAACAATGATAACCGATCAAGAACCAACTGAACTCATACGAATGTGTGTATGGTCACACTGTCTCAACAAACTACAACAGGAAATCCCATACTCGTTGCATATTATCGTAGATGATTGTGACAAAATTAAACTGGACAGTGGTGATGATCGAGTATACATTCACGTGCGCATACGGTGCAAAAATGAACGTCAGTTATTACGTGTTTTAGGTATGAAA GGAAATACGATAAAGGAGATTTCAAGCGCTGTTAAACTGGAGCTCATGACAATGTTCAGATGTAATACGGTTGTAAAATTAACTGCCGAGTTATTCAAAATCGACTCTAATATCAAAAAGAAGCTTCGCCGCACCCAAGATTTTTCCGAAGTTTTTCCAGTAAATGACAGATTGGAATAGTTTATTTTGGAGTTTGATTTGTAAATGCTTTGTTTTTCTTATCTTTTTAACTACGTTATTTCATTTTGTAACAACAGTTAATATCGATGAATTTGATTAAAATAGTTTCCGCCACT]


>consensus_5915#0 CCCTCCGAGCCAANAATTCGGCACGAGGAGAACACAGGGATGCATTTTTTGATTGTCATA ACATACCGGGAAACGATAAATTAATGCCTTCAGATAGTCAAAGCCTTCATAAATCAAAGG CTGAAATCAATCAACTTCTTTTGAACACATGTGGTGAATCGAATCAAATTCTGGATGCAA ACAGTGATTCAGATCATATAGATTCTATGTTGGAAACGTTAAAACAACAATTGCTACTTC AGACAGCATCACCTGAGGAAGTTTGTAATCGTCGAAATCGTTGGTTAGAGATAACAAAAT CAACTAAAGGGGTTACAAAGTGGTTAGGTTTCAGTGAGGTTTTCATGGTCTCTTCGTTTA TAGGCGATGGGATAGACAAATTAAGGGACTTCCTTGTATCCAAAGCTATACCGACTCGTT CTTGGATCCTACCTCCAACAATGATAACCGATCAAGAACCAACTGAACTCATACGAATGT GTGTATGGTCACACTGTCTCAACAAACTACAACAGGAAATCCCATACTCGTTGCATATTA TCGTAGATGATTGTGACAAAATTAAACTGGACAGTGGTGATGATCGAGTATACATTCACG TGCGCATACGGTGCAAAAATGAACGTCAGTTATTACGTGTTTTAGGTATGAAAGGGAAAT ACGATAAGGAGATTTCAAGCGCTGTTAAACTGGAGCTCATGACAATGTTCAGATGTAATA CGGTTGTAAAATTAACTGCCGAGTTATTCAAAATCGACTCTAATATCAAAAAGAAGCTTC GCCGCACCCAAGATTTTTCCGAAGTTTTTCCAGTAAATGACAGATTGGAATAGTTTATTT TGGAGTTTGATTTGTAAATGCTTTGTTTTTCTTATCTTTTTAACTACGTTATTTCATTTT GTAACAACAGTTAATATCGATGAATTTGATTAAAATAGTTTCCGCCACT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)