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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5927 cluster # 5927       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5927#0 length = 688 sequences # 3  

consensusID : consensus_5927#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 688
fasta sequence
                              [TGAGATTTGTTGCATGATTTGTGGTGAAATTGAATTACCTTCTGTATTCACCGGATAAAAATGGACAATCTTTTACAGGAAAATCATAGTCTATTAAAGAAATTAGAATTGAAAAAGGAAATGGAAGCAGCTTATCTCGATGAGATCGAACAACTTAGATCAGTAATTACTCAATTACAACGAGAAAAGACGTCGATTTCCACTTCACGTATTGATGACAATTCGTCATTA-TTGTATGACCTAGAAGGTCGTGTTGAAAAATCTGAAGAAAAAGTTGCTCTACTTACCAAAGAGCTTGATTTAGCCAAAAAGCGGGAAGCTGATCTACTGGAACAATTAAATAGTTTTGTAAATAAAGTGGATAGTATTTCTGAATGTTCTGTAACTGTTCCTGAACCACACAATTCTTTGGCGGAGGAAGTCATTCGGTTGAAAGAGGAACTATCTAGCAAAGAAACTTCTAATCGTCTTGAACAATCAAAATTAACTCGTCAAATTCAAGAATCGGAGGATGATCGTCAAAATTTACAGGATTATATTATTGAATTAGATCGTCAGTTAAAAGATTGTCGATTAGAATTAACTGATACTCGAGCTCAACTAGAAGCATTACAAATTCAATCAAATTCTACAGAAAGCACACGAGGGAATTCAGTATTTTCTGAAATTGAAGTTACGACAGTATTAC]

[+] EMBL AI976219             [TGAGATTTGTTGCATGATTTGTGGTGAAATTGAATTACCTTCTGTATTCACCGGATAAAAATGGACAATCTTTTACAGGAAAATCATAGTCTATTAAAGAAATTAGAATTGAAAAAGGAAATGGAAGCAGCTTATCTCGATGAGATCGAACAACTTAGATCAGTAATTACTCAATTACAACGAGAAAAGACGTCGATTTCCACTTCACGTATTGATGACAATTCGTCATTA TTGTATGACCTACAAGGTCGTGTTGAAAAATCTGAAGAAAAAGTTTCTCTACTTACCAAAGAGCTTGATTTAGCCAAAAAGCGGGAAGCTGATCTACTGGAACAATTAAATAGTTTTGTAAATAAAGTGGATAGTATTTCTGAATGTTCTGTAACTGTTCCTGAACCACACAATTCTTTGGCGGAGGAAGTCATTCGGTTGAAAGAGGAACTATCTAGCAAAGAAACTTCTAATCGTCTTGAACAATCAAAATTAACTCGTCAAATTCAAGAATCGGAGGATGATCGTCAAAATTTACAGGATTATATTATTGAATTAGATCGTCAGTTAAAAGATTGTCGATTAGAATTAACTGATACTCGAGCTCAACTAGAAGCATTACAAATTCAATCAAATTCTACAGAAAGCACACGAGGGAATTCAGTATTTTCTGAAATT                   ]
[-] EMBL CD195438             [                                                                                                                                                                                                                  ATTGATGACAATTCGTCATTA TTGTATGACCTAGAAGGTCGTGTTGAAAAGTCTGAAGAAAAAGTTGCTCTACTTACCAAAGAGCTTGATTTAGCCAAAAAGCGGGAAGCTGATCTACTGGAACAATTAAATAGTTTTGTAAATAAAGTGGATAGTATTTCTGAATGTTCTGTAACTGTTCCTGAACCACACAATCCTTTGGCGGAGGAAGTCATTCGGTTGAAAGAGGAACTATCTAGCAAAGAAACTTCTAATCGTCTTGAACAATCAAAATTAACTCGTCAAATTCAAGAATCGGAGGATGATCGTCAAAATTTACAGGATTATATTATTGAATTAGATCGTCAGTTAAAAGATTGTCGA                                                                                                                   ]
[-] EMBL CD152123             [                                                                                                                                                                                                                             TTCGTCATTATTTGTATGACCTAGAAGGTCGTGTTGAAAAATCTGAAGAAAAAGTTGCTCTACTTACCAAAGAGCTTGATTTAGCCAAAAAGCGGGAAGCTGATCGACTGGAACAATTAAATAGTTTTGTAAATAAAGTGGATAGTATTTCTGAATGTTCTGTAACTGTTCCTGAACCACACAATTCTTTGGCGGAGGAAGTCATTCGGTTGAAAGAGGAACTATCTAGCAAAGAAACTTCTAATCGTCTTGAACAATCAAAATTAACTCGTCAAATTCAAGAATCGGAGGATGATCGTCAAAATTTACAGGATTATATTATTGTATTAGATCGTCAGTTAAAAGATTGTCGATTAGAATTAACTGATACTCGAGCTCAACTAGAAGCATTACAAATACAATCAAATTCTACAGAAAGCACACGAGGGAATTCAGTATTTTCTGAAATTGAAGTTACGACAGTATTAC]


>consensus_5927#0 TGAGATTTGTTGCATGATTTGTGGTGAAATTGAATTACCTTCTGTATTCACCGGATAAAA ATGGACAATCTTTTACAGGAAAATCATAGTCTATTAAAGAAATTAGAATTGAAAAAGGAA ATGGAAGCAGCTTATCTCGATGAGATCGAACAACTTAGATCAGTAATTACTCAATTACAA CGAGAAAAGACGTCGATTTCCACTTCACGTATTGATGACAATTCGTCATTATTGTATGAC CTAGAAGGTCGTGTTGAAAAATCTGAAGAAAAAGTTGCTCTACTTACCAAAGAGCTTGAT TTAGCCAAAAAGCGGGAAGCTGATCTACTGGAACAATTAAATAGTTTTGTAAATAAAGTG GATAGTATTTCTGAATGTTCTGTAACTGTTCCTGAACCACACAATTCTTTGGCGGAGGAA GTCATTCGGTTGAAAGAGGAACTATCTAGCAAAGAAACTTCTAATCGTCTTGAACAATCA AAATTAACTCGTCAAATTCAAGAATCGGAGGATGATCGTCAAAATTTACAGGATTATATT ATTGAATTAGATCGTCAGTTAAAAGATTGTCGATTAGAATTAACTGATACTCGAGCTCAA CTAGAAGCATTACAAATTCAATCAAATTCTACAGAAAGCACACGAGGGAATTCAGTATTT TCTGAAATTGAAGTTACGACAGTATTAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)