cluster # 5940

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Schistosoma mansoni
cluster # 5940 cluster # 5940 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5940#0 length = 482 sequences # 3

consensusID : consensus_5940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 482
fasta sequence

                              [AATAGTAGGTGAATCCGACACACATTGAGGAAATCATCAAACTGCATCACGAAACAAAAGCTAACTTAGAATCCTGAAGGGATGTGGAAGGAAAAAGAACATACTGCCCCGAGAATCGGAAGCACACTTGCATAGGGTAAATAGCAACTAGAAACAACTGGTAAGGATTGTCCAGAACAGAGTTGTATGGAGAGTGCTAGCGGGCGGACTATGCTCCCCCACGAAAGGTAACAGGCGTAAGTAAGTAAGAAAGTAATTAGTTCAAATGGATTTCACTCACTTACACCTAATTAGGTCAATGTGACCAGGTAGTATCATTAGCCTTTAAACAATAAATAAACCTCAAATCAAATTCAACAGCTTTATATCTCGGCCAGTGTAATGCGTTAAAGGCGATGAGTGAACATATGCAGTTTGCAAATATGATATTCACCTCATTAGATGACAGTTCATAGCTTCATCAATAGACGT-TCTTTTCTATC]

[+] EMBL CD127377             [AATAGTAGGTGAATCCGACACACATTGAGGAAATCATCAAACTGCATCACGAAACAAAAGCTAACTTAGAATCCTGAAGGGATGTGGAAGGAAAAAGAACATACTGCCCCGAGAATCGGAAGCACACTTGCATAGGGTAAATAGCAACTAGAAACAACTGGTAAGGATTGTCCAGAACAGAGTCGTATGGAGAGTGCTAGCGGGCGGACTATGCTCCCCCACGAAAGGTAACAGGCGTAAGTAAGTAAGAAAGTAATTAGTTCAAATGGATTTCACTCACTTACACCTAATTAGGTCAATGTGACCAGGTAGTATCATTAGCCTTTAAACAATAAATAAACCTCAAATCAAATTCAACAGCTTTATATCTCGGCCAGTGTAATGCGTTAAAGGCGATGAGTGAACATATGCAGTTTGCAAATATGATATTCACCTCATTAGATGACAGTTCATAGCTTCATCAATAGACGTATCTT       ]
[-] EMBL CD127281             [                    CACATTGAGGAAATCATCAAACTGCATCACGAAACAAAAGCTAACTTAGAATCCTGAAGGGATGTGGAAGGAAAAAGAACATACTGCCCCGAGAATCGGAAGCACACTTGCATAGGGTAAATAGCAACTAGAAACAACTGGTAAGGATTGTCCAGAACAGAGTTGTATGGAGAGTGCTAGCGGGCGGACTATGCTCCCCCACGAAAGGTAACAGGCGTAAGTAAGTAAGAAAGTAATTAGTTCAAATGGATTTCACTCACTTACACCTAATTAGGTCAATGTGACCAGGTAGTATCATTAGCCTTTAAACAATAAATAAACCTCAAATCAAATTCAACAGCTTTATATCTCGGCCAGTGTAATGCGTTAAAGGCGATGAGTGAACATATGCAGTTTGCAAATATGATATTCACCTGATTAGATGACAGTTCATAGCTTCAACAATAGACGT TCTTTTCTATC]
[-] EMBL CD128188             [                    CACATTGAGGAAATCATCAAACTGCATCACGAAACAAAAGCTAACTTAGAATCCTGAAGGGATGTGGAAGGAAAAAGAACATACTGCCCCGAGAATCGGAAGCACACTTGCATAGGGTAAATAGCAACTAGAAACAACTGGTAAGGATTGTCCAGAACAGAGTTGTATGGAGAGTGCTAGCGGGCGGACTATGCTCCCCCACGAAAGGTAACAGGCGTAAGTAAGTAAGAAAGTAATTAGTTCAAATGGATTTCACTCACTTACACCTAATTAGGTCAATGTGACCAGGTAGTATCATTAGCCTTTAAACAATAAATAAACCTCAAATCAAATTCAACAGCTTTATATCTCGGCCAGTGTAATGCGTTAAAGGCGATGAGTGAACATATGCAGTTTGCAAATATGATATTCACCTCATTAGATGACAGTTCATAGCTTCATCAATAGACGT TCTTT      ]




>consensus_5940#0
AATAGTAGGTGAATCCGACACACATTGAGGAAATCATCAAACTGCATCACGAAACAAAAG
CTAACTTAGAATCCTGAAGGGATGTGGAAGGAAAAAGAACATACTGCCCCGAGAATCGGA
AGCACACTTGCATAGGGTAAATAGCAACTAGAAACAACTGGTAAGGATTGTCCAGAACAG
AGTTGTATGGAGAGTGCTAGCGGGCGGACTATGCTCCCCCACGAAAGGTAACAGGCGTAA
GTAAGTAAGAAAGTAATTAGTTCAAATGGATTTCACTCACTTACACCTAATTAGGTCAAT
GTGACCAGGTAGTATCATTAGCCTTTAAACAATAAATAAACCTCAAATCAAATTCAACAG
CTTTATATCTCGGCCAGTGTAATGCGTTAAAGGCGATGAGTGAACATATGCAGTTTGCAA
ATATGATATTCACCTCATTAGATGACAGTTCATAGCTTCATCAATAGACGTTCTTTTCTA
TC

clustalw multiple alignements is not computed in this case