Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5964 cluster # 5964       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5964#0 length = 636 sequences # 3  

consensusID : consensus_5964#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 636
fasta sequence
                              [GGTAATAAAACAAGAAGAGAGGTGTATCGCGATAGTAGTGTAAAGCTTGGATTACCGCCGTGTGTTACGTAACTCCTAATTAGATCCCACTTACTACTGATTACAATTAAACAATGCGTGAATGTATTAGTTTACATATTGGTCAAGCTGGTGTACAAATGGGTAATGCATGTTGGGAATTATATTGTCTTGAACATGGTATACAACCAAATGGTCATATGGCAACTAATGAAACAAAGGAAAAAATTGATGGTGCATTTAATACA-TTTTTTACTGAAATGACATCTGGAAAACATGTACCTCGAGCGATATTCGTCGACTTAGAACCAAATGTTGTAGATGAAGTACGATGTGGAACATATAAACAATTATTTCATCCAGAACAATTAATTACTGGTGAAGAGGATGCTGCTAATAACTACGCTCGCGGTCATTATACAGTTGGTAAAGAAATTATTGATTTAGTATTAGAACGTGTACGTAAATCACCGGATCAATGTAGTGGACTTCAGGGATTCCTGATCTTTCATTCATTNNGNTGGTGGTACCGGTTCTGGATTTACATCATTACTAATGGAACGTTTAAGTGTTGAATATGGTAAATGTTCTAAATTAGAATTTGCTATTTATCCAGCA]

[+] EMBL CD087367             [GGTAATAAAACAAGAAGAGAGGTGTATCGCGATAGTAGTGTAAAGCTTGGATTACCGCCGTGTGTTACGTAACTCCTAATTAGATCCCACTTACTACTGATTACAATTAAACAATGCGTGAATGTATTAGTTTACATATTGGTCAAGCTGGTGTACAAATGGGTAATGCATGTTGGGAATTATATTGTCTTGAACATGGTATACAACCAAATGGTCATATGGCAACTAATGAAACAAAGGAAAAAATTGATGGTGCATTTAATACATTTTTTTACTGAAATGACATCTGGAAAACATGTACCTCGAGCGATATTCGTCGACTTAGAACCAAATGTTGTAGATGAAGTACGATGTGGAACATATAAACAATTATTTCATCCAGAA                                                                                                                                                                                                                                                             ]
[+] EMBL CD152968             [          CAAGAAGAGAGGTGTATCGCGTTAGTAGTGTAAAGCTTGGATTACCGCCGTGTGTTACGTAACTTCTAATTAGATCCCACTTACTACTGATTACAATTAAACAATGCGTGAATGTATTAGTTTACATATTGGTCAAGCTGGTGTACAAATGGGTAATGCATGTTGGGAATTATATTGTCTTGAACATGGTATACAACCAAATGGTCATATGGCAACTAATGAAACAAAGGAAAAAATTGATGGTGCATTTAATACA TTTTTTACTGAAATGACATCTGGAAAACATGTACCTCGAGCGATATTCGTCGACTTAGAACCAAATGTTGTAGATGAAGTACGATGTGGAACATATAAACAATTATTTCATCCAGAACAATTAATTACTGGTGAAGAGGATGCTGCTAATAACTACGCTCGCGGTCATTATACAGTTGGTAAAGAAATTATTGATTTAGTATTAGAACGTGTACGTAAATCACCGGATCAATGTAGTGGACTTCAGGGATTCCTGATCTTTCATTCATTNNGNTGGTGGTACCGGTTCTGG                                                                               ]
[+] EMBL CD153256             [                                                                                                                                                                                                                                                       TGATGGTGCATTTAATACA TTTTTTACTGAAATGACATCTGGAAAACATGTACCTCGAGCGATATTCGTCGACTTAGAACCAAATGTTGTAGATGAAGTACGATGTGGAACATATAAACAATTATTTCATCCAGAACAATTAATTACTGGTAAAGAGGATGCTGCTAATAACTACGCTCGCGGTCATTATACAGTTGGTAAAGAAATTATTGATTTAGTATTAGAACGTGTACGTAAATCAGCGGATCAATGTAGTGGACTTCAGGGATTCCTGATCTTTCATTCATT TGGTGGTGGTACCGGTTCTGGATTTACATCATTACTAATGGAACGTTTAAGTGTTGAATATGGTAAATGTTCTAAATTAGAATTTGCTATTTATCCAGCA]


>consensus_5964#0 GGTAATAAAACAAGAAGAGAGGTGTATCGCGATAGTAGTGTAAAGCTTGGATTACCGCCG TGTGTTACGTAACTCCTAATTAGATCCCACTTACTACTGATTACAATTAAACAATGCGTG AATGTATTAGTTTACATATTGGTCAAGCTGGTGTACAAATGGGTAATGCATGTTGGGAAT TATATTGTCTTGAACATGGTATACAACCAAATGGTCATATGGCAACTAATGAAACAAAGG AAAAAATTGATGGTGCATTTAATACATTTTTTACTGAAATGACATCTGGAAAACATGTAC CTCGAGCGATATTCGTCGACTTAGAACCAAATGTTGTAGATGAAGTACGATGTGGAACAT ATAAACAATTATTTCATCCAGAACAATTAATTACTGGTGAAGAGGATGCTGCTAATAACT ACGCTCGCGGTCATTATACAGTTGGTAAAGAAATTATTGATTTAGTATTAGAACGTGTAC GTAAATCACCGGATCAATGTAGTGGACTTCAGGGATTCCTGATCTTTCATTCATTNNGNT GGTGGTACCGGTTCTGGATTTACATCATTACTAATGGAACGTTTAAGTGTTGAATATGGT AAATGTTCTAAATTAGAATTTGCTATTTATCCAGCA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)