These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5980#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 843 fasta sequence [GTGGTGTGCAGAATACTCGCCGCAGACGTCGTTCTTTGGTTACTGGCACGAATTTGTCACATGCCGAATCTGACATTCAGAGTAAAGGAGGAGTCAAAGATATGAATAGTTTGAATCCTAATTATGAGTCAAATGAAGCGAAACGCTTAGTGCAAGATATTTTAGCGGTACGTGCTGAGCAAGAAGATTCCGGTTTTGTTAGATTTCCTTTGACCATCACATCAGTGTTGGATATTACAGGTTGGCGAGTTCTTCATTGTGCTGACAATTTAGATTTATTGGCATACACAGAGTTGCAAACATTAGAAACTATAAAAAATATGGAGACCGATTTAGCCGACCAGCTTCATTGCATTTCTACTCAGAGTGTTACATCATCACATCTTAGTGTATCTCAAGGTGTCAGTGAAACAGTGAAATCTGTAGAGTCTGGATTAAAATCAGATGAATCCGAGATGGCTAG-TCAGTTTAATATAGCTATTGAATTAATCAA-AGGCATTTCTCAACGTAAGAAAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTTCAGTCCTGGAATTCACAATCTAATTGAAGAGCTATAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATACTTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTTCCGATCCATAATCCTATAGTCCGACAAGTTCGACGTCCAAATAACGTTGCAATCACTAGATGCTCAAAATCACTAACTTCCTTAATTTAAAATTCACCAAATAGCTATCCAGGAACGAGT] [+] EMBL CD128050 [GTGGTGTGCAGAATACTCGCCGCAGACGTCGTTCTTTGGTTACTGGCACGAATTTGTCACATGCCGAATCTGACATTCAGAGTAAAGGAGGAGTCAAAGATATGAATAGTTTGAATCCTAATTATGAGTCAAATGAAGCGAAACGCTTAGTGCAAGATATTTTAGCGGTACGTGCTGAGCAAGAAGATTCCGGTTTTGTTAGATTTCCTTTGACCATCACATCAGTGTTGGATATTACAGGTTGGCGAGTTCTTCATTGTGCTGACAATTTAGATTTATTGGCATACACAGAGTTGCAAACATTAGAAACTATAAAAAATATGGAGACCGATTTAGCCGACCAGCTTCATTGCATTTCTACTCAGAGTGTTACATCATCACATCTTAGTGTATCTCAAGGTGTCAGTGAAACAGTGAAATCTGTAGAGTCTGGATTAAAATCAGATGAATCCGAGATGGCTAG TCAGTTTAATATAGCTGTTGAATTAATCAA AGGCATTTCTCAA ] [+] EMBL CD083388 [ AACAGTGAAATCTGTAGAGTCTGGATT AAATCAGATGAATCCGAGATGGCTAGCTCAGTTTAATATAGCTATTGAATTAATCAA AGGCATTTCTCAACGTAAGAAAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTTCAGTCCTGGAATTCACAATCTAATTGAAGAGCTATAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATACTTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTTCCGATCCATAATCCTATAGTCCGACAAGTTCGACGTCCAAATAACGTTGCAATCACTAGATGCTCAAAATCACTAACTTCCTTAATTTAAAATTCACCAAATAGCTATCCAGGAACGAGT] [+] EMBL CD083427 [ cAACAGTGAAATCTGTAGAGTCT GATTAAAATCAGATGAATCCGAGATGGCTAG TCAGTTTAATATAGCTATTGAATTAATCAACAGGCATTTCTCAACGTAAAACAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTACAGTCCTGGAATACACAATCTATTTGAAGAGCTAGAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATAATTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTACCGACCCATAATCCTATAGTCCGACAAGTTCGACGTCGAAGTAACGTTGCAATCAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||