cluster # 5981

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Schistosoma mansoni
cluster # 5981 cluster # 5981 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5981#0 length = 420 sequences # 3

consensusID : consensus_5981#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 420
fasta sequence

                              [CTTTCCCTGCTGCTCCACACGGGAAAAAGACGTCAATTTTCTCGCTCTGCAAATGATGTATGCGAATCGGCTGCCGGTGACGGAATCGGTCTTTT-TGGCGCTGA-AGGCAGTGCA-ACATCCCGAGTCGCTCGCGACACAGCTTTCCGATTTGCAGCGCGCGCTCGCATCGATTCCAAAGCAACATCTATCGGAACTGTCGGAAGCGCAACAAACGCTCCTCGCAGAGTTAGAGCGAATGAATCGCCTTTTGGTTGACAATCAGCAAGAACAAAGGCTCGATCAACTGCCTAAAACGTTCGCTAAACATATGAAAGCGCTGATCAAAGCGCTCGGGTTGGAATACGAAGCGAACGTAGCAAAAGACGTGCAAACGGCTCGAGCGATGGATGGGTTAAAACCGCTACTGTTGCGCGAGCAGCA]

[+] EMBL CD083363             [CTTTCCCTGCTGCTCCACACGGGATATAGACGTCAATTTTCTCGCTCTGCAAATGATGTATGCGAATCGGCTGCCGGTGACGGAATCGGTCTTTTCTGGCGCTGACAGGCTGTGCATACATCCCGAGTCGCTCGCGACACAGCTTTCCGATTTGCAGCGCGCGCTCGCTTCGATTCCCAAGCAACATCTATCGGAACTGTCGGAAGCGCAACAAACGCTCCTCGCAGAGTTAGAGCGAATTAATCGCCTTTTGGTTGACAATCAGCAAGAACAAAGGCTCGATCAACTGCCTAAAACGTTCGCTAAACATATGAAAGCGCTGATCAAAGCGCTCGGGTTGGAATACGAAGCGAACGTAGCACAAGACGTGCAAACGGCTCGAGCGATGGATGGGTTAAAACCGCTACTGTTGCGCGAGCAGCA]
[+] EMBL CD163182             [                        AAAAGACGTCAATTTTCTCGCTCTGCAAATGATGTATGCGAATCGGCTGCCGGTGACGGAATCGGTCTTTT TGGCGCTGA AGGCAGTGCA ACATCCCGAGTCGCTCGCGACACAGCTTTCCGATTTGCAGCGCGCGCTCGCATCGATTCCAAAGCAACATCTATCGGAACTGTCGGAAGCGCAACAAACGCTCCTCGCAGAGTTAGAGCGAATGAATCGCCTTTTGGTTGACAATCAGCAAGAACAAAGGCTCGATCAACTGCCGAAAACGTTCGCTAAACATATGAAAGCGCTGATCAAAGCGCTCGGGTTGGAATACGAAGCGAACGTAGCAAAAGACGTGCAAACGGCTCGAGCGATGGATGGGTTAAAACCGCT                  ]
[+] EMBL CD163474             [                        AAAAGACGTCAATTTTCTCGCTCTGCAAATGATGTATGCGAATCGGCTGCCGGTGACGGAATCGGTCTTTT TGGCGCTGA AGGCAGTGCA ACATCCCGAGTCGCTCGCGACACAGCTTTCCGATTTGCAGCGCGCGCTCGCATCGATTCCAAAGCAACATCTATCGGAACTGTCGGAAGCGCAACAAACGCTCCTCGCAGAGTTAGAGCGAATGAATCGCCTTTTGGTTGACAATCAGCAAGAACAAAGGCTCGATCAACTGCCTAAAACGTTCGCTAAACATATGAAAGCGCTGATCAAAGCGCTCGGGTTGGAATACGAAGCGAACGTAGCAAAAGACGTGCAAACGGCTCGAGCGATGGATGGGTTAAAACCGCT                  ]




>consensus_5981#0
CTTTCCCTGCTGCTCCACACGGGAAAAAGACGTCAATTTTCTCGCTCTGCAAATGATGTA
TGCGAATCGGCTGCCGGTGACGGAATCGGTCTTTTTGGCGCTGAAGGCAGTGCAACATCC
CGAGTCGCTCGCGACACAGCTTTCCGATTTGCAGCGCGCGCTCGCATCGATTCCAAAGCA
ACATCTATCGGAACTGTCGGAAGCGCAACAAACGCTCCTCGCAGAGTTAGAGCGAATGAA
TCGCCTTTTGGTTGACAATCAGCAAGAACAAAGGCTCGATCAACTGCCTAAAACGTTCGC
TAAACATATGAAAGCGCTGATCAAAGCGCTCGGGTTGGAATACGAAGCGAACGTAGCAAA
AGACGTGCAAACGGCTCGAGCGATGGATGGGTTAAAACCGCTACTGTTGCGCGAGCAGCA

clustalw multiple alignements is not computed in this case