Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5988 cluster # 5988       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5988#0 length = 469 sequences # 3  

consensusID : consensus_5988#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 469
fasta sequence
                              [TGGCCTCGAGGCCAGAATCGGCACGAGGAAAACATAGACGAATACATACCGGTGAAAGACCGTATCGTTGCGAATTTTGCGGCAGATCATTTTCTGATAATAGTAGTTATAGCGCACATAAAAACGTAGTCAGCGGTGTACACCTATTACCAGCACTAACAACAACAATACATTTAGTCTTCTTGGTAATGTTGGAGATTGCGGAAAAACAAAGTGCGAGGGTTGTGCTTTTCTCGATCCACATACACAAGCAGTTATACATCCTGCAGCGGCGGCCGCAGCTGCCGCTGTATCTGTTGAACACTTTTTAACGAATTCAAATATTGGTATGTCTAAAATAAATGGTGGTGAATTTTGTCCAACTTCTTTAAATTTAACATTTCCTAATCCACCGAATACAAATACTATGCCAGCTACAGCATTAACATGAATTACATTAAAAATTCTTGCATTTGACACAATAATGTAT]

[+] EMBL CD083299             [TGGCCTCGAGGCCAGAATCGGCACGAGGAAAACATAGACGAATACATACCGGTGAAAGACCGTATCGTTGCGAATTTTGCGGCAGATCATTTTCTGATAATAGTAGTTATAGCGCACATAAAAACGTAGTCAGCGGTGTACACCTATTACCAGCACTAACAACAACAATACATTTAGTCTTCTTGGTAATGTTGGAGATTGCGGAAAAACAAAGTGCGAGGGTTGTGCTTTTCTCGATCCACATACACAAGCAGTTATACATCCTGCAGCGGCGGCCGCAGCTGCTGCTGTATCTGTTGAACACTTTTTAACGAATTCAAATATTAGTATGTCTAAAATAAATGGTGGTGAATTTTGTCCAACTTCTTTAAATTTAACATTTCCTAATCCACCGAATACAAATACTATGCCAGCTACAGCATTAACATGAATTACATTAAAAATTCTTGCATTTGACACAATAATGTAT]
[+] EMBL CD120466             [                                                                                                                                GTCAGCGGTGTACACCTATTACCAGCACTAACAACAACAATACATTTAGTCTTCTTGGTAATGTTGGAGATTGCGGAAAAACAAAGTGCGAGGGTTGTGCTTTTCTCGATCCACATACACAAGCAGTTATACATCCTGCAGCGGCGGCCGCAGCTGCCGCTGTATCTGTTGAACACTTTTTAACGAATTCAAATATTGGTATGTCTAAAATAAGTGGTGGTGAATTTTGTCCAACTTCTTTAAATTTAACATTTCCTAATCCACCGA                                                                          ]
[+] EMBL CD120329             [                                                                                                                                GTCAGCGGTGTACACCTATTACCAGCACTAACAACAACAATACATTTAGTCTTCTTGGTAATGTTGGAGATTGCGGAAAAACAAAGTGCGAGGGTTGTGCTTTTCTCGATCCACATACACAAGCAGTTATACATCCTGCAGCGGCGGCCGCAGCTGCCGCTGTATCTGTTGAACAC TTTTAACGAATTCAAATATTGGTATGTCTAAAATAAATGGTGGTGAATTTTGTCCAACTTCTTTAAATTTAACATTTCCTAATCCACCGA                                                                          ]


>consensus_5988#0 TGGCCTCGAGGCCAGAATCGGCACGAGGAAAACATAGACGAATACATACCGGTGAAAGAC CGTATCGTTGCGAATTTTGCGGCAGATCATTTTCTGATAATAGTAGTTATAGCGCACATA AAAACGTAGTCAGCGGTGTACACCTATTACCAGCACTAACAACAACAATACATTTAGTCT TCTTGGTAATGTTGGAGATTGCGGAAAAACAAAGTGCGAGGGTTGTGCTTTTCTCGATCC ACATACACAAGCAGTTATACATCCTGCAGCGGCGGCCGCAGCTGCCGCTGTATCTGTTGA ACACTTTTTAACGAATTCAAATATTGGTATGTCTAAAATAAATGGTGGTGAATTTTGTCC AACTTCTTTAAATTTAACATTTCCTAATCCACCGAATACAAATACTATGCCAGCTACAGC ATTAACATGAATTACATTAAAAATTCTTGCATTTGACACAATAATGTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)