Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6063 cluster # 6063       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6063#0 length = 482 sequences # 4  
consensusID : consensus_6063#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 482
fasta sequence 
                              [TTGATCGCTGCAGGATTATCAGAAGGGATTGGTGCTGGTGATACTGCGACAACTGGATCATCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAATCGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTAACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCAAATTACGACAGTCGTCCACGTCAGATTGGGAGAAAACTTGTATCACAGTCACAGCCTACAAGTCGTGAAGTTTCACCATCACGTCTAGCCTATTTCACTGCCTATGGTACTACTACATCTAATAATAATGATGGACAAAAATTACAATTTAATACAACTAATCCTAATCGTAATGGTACAATAGGATTGGTAGATAATAATAATACTACTACAGAACGTACTACACGTTTGTTAATGAATTC]

[+] EMBL CD090042             [TTGATCGCTGCAGGATTATCAGAAGGGATTGGTGCTGGTGATACAGCGACAACTGGATCATCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAATCGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTAACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCAAATTACGACAGTCGTCCACGTCAGATTGGGAGAAAACTTGTATCACAGTCACAGCCTACAAGTCGTGAAGTTTCACCATCACGTCTAGCCTATTTCACTGCCTATGGTACTACTACATCTAATAATAATGATGGACAAAAATTACAATTTAATACAACTAATCCTAATCGTAATGGTACAATAGGATTGGTAGATAATAATAATACTACTACAGAACGTACTACACGTTTGTTAATGAATTC]
[+] EMBL CD090102             [TTGATCGCTGCAGGATTATCAGAAGGGATTGGTGCTGGTGATACTGCGACAACTGGATCATCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAATCGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTAACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCAAATTACGACAGTCGTCCACGTCAGATTGGGAGAAAACTTGTATCACAGTCACAGCCTACAAGTCGTGAAGTTTCACCATCACGTCTAGCCTATTTCACTGCCTATGGTACTACTACATCTAATAATAATGATGGACAAAAATTACAATTTAATACAACTAATCCTAATCGTAATGGTACAATAGGATTGGTAGATAATAATAATACTACTACAGAACGTACTACACGCTTGTTAATGAATTC]
[+] EMBL CD089972             [TTGATCGCTGCAGGATTATCAGAAGGGATTGGTGCTGGTGATACTGCGACAACTGGATCATCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAATCGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTAACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCAAATTACGACAGTCGTCCACGTCAGATTGGGAGAAAACTTGTATCACAGTCACAGCCTACAAGTCGTGAAGTTTCACCATCACGTCTAGCCTATTTCACTGCCTATGGTACTACTACATCTAATAATAATGATGGACAAAAATTACAATTTAATACAACTAATCCTAATCGTAATGGTACAATAGGATTGGTAGATAATAATAATACTACTACAGAACGTACTACACGTTTGTTAATGAATTC]
[-] EMBL CD164092             [                                      TGATACTGCGACAACTGGATCATCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAATCGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTAACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCAGATTACGACA                                                                                                                                                                                                                                        ]




>consensus_6063#0
TTGATCGCTGCAGGATTATCAGAAGGGATTGGTGCTGGTGATACTGCGACAACTGGATCA
TCTCGGAGTCAACCTGGCAGTCAGTCAAATTTAACTTATCAAAGTACTAAACGACCAAAT
CGACCTGTATTAGGCACTAGTTCATTAGCCAATAATACAAATCGCAGTCGTCCACCATTA
ACTAGTCAGAATGAGTATAATACCGTTGGTCGTTCTTACCGTCAAGGGTCAATTGCTTCA
AATTACGACAGTCGTCCACGTCAGATTGGGAGAAAACTTGTATCACAGTCACAGCCTACA
AGTCGTGAAGTTTCACCATCACGTCTAGCCTATTTCACTGCCTATGGTACTACTACATCT
AATAATAATGATGGACAAAAATTACAATTTAATACAACTAATCCTAATCGTAATGGTACA
ATAGGATTGGTAGATAATAATAATACTACTACAGAACGTACTACACGTTTGTTAATGAAT
TC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)