Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6082 cluster # 6082       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6082#0 length = 936 sequences # 4  

consensusID : consensus_6082#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 936
fasta sequence
                              [AGTGACCGAGATGAGTCTAACCATCCACTGTTGAGACGTGCTTTTTGAACTAAATTCTTGGGTTTCATTAACCAGCTATCGGCAAACACTGCTTTCGCAGAACGTCTCAATGAACAGTCAGCATAGCGAGCGAAATCAACTCTTTCCTGATCTAACGAGTTGTCAGATTTAAATCGCATTATTGTACCAGCATTTGAATTCAATGTGTTATACGGATTAATTTTTTGTCCATCAACTGTAGGATAAGCTGAAGACGCAGATGAAGGGACCTTCGATTTAACAGAAGACTGATCATTTCTTGGATTGGGCAAACTTGTACCAGGACGTCGTAATCCCGGACGAACAGTAGGTAATGGGCAATTTGTTTTAAGCATATTTTTAGTGATAGGAAGTGTTAAAGATAATTCCTCTGAATGTCGTATGTTTAATTCTTTACATATATCCCGAACGACAGTAAACAACCGGGCGGCATAATTGGCACGAAGTACTAGAGGAGTTAAAGAGGGTAAAACAATTTGAACATCGTTATGCATACGATGAAACACCAATCTAGCATCCGACTGAATTCCATATTGATCCAATGTTGTCCGGCTCTGCAAAAGCCATACATTTCTATCGACCCACCATATTGCATGATCTGACCAACTTTGTTGTAACTTCACTTTTTCGACAATTAGATGCATCAAACCACCCAGTGGTAGATCACCCGAAACACGTACTGAAACATTTGTGTTTATGTCTTCAACGCGAACAGATAATTCCCAAGATCCATCAATATAATTTCCATCCACTACCATCCGACTGATAGTTTCTGTTCCATTGAAAGTATGAGTACCTCCATTATGGACACTAAATGGATCATATGCAGACATCGGTTAAAAGTACTTCACAAATTGCATGCACACGTAGTCCAGATAGTATCACTGACAATACCGA]

[-] EMBL CD115465             [AGTGACCGAGATGAGTCTAACCATCCACTGTTGAGACGTGCTTTTTGAACTAAATTCTTGGGTTTCATTAACCAGCTATCGGCAAACACTGCTTTCGCAGAACGTCTCAATGAACAGTCAGCATAGCGAGCGAAATCAACTCTTTCCTGATCTAACGAGTTGTCAGATTTAAATCGCATTATTGTACCAGCATTTGAATTCAATGTGTTATACGGATTAATTTTTTGTCCATCAACTGTAGGATAAGCTGAAGACGCAGATGAAGGGACCTTCGATTTAACAGAAGACTGATCATTTCTTGGATTGGGCAAACTTGTACCAGGACGTCGTAATCCCGGACGAACAGTAGGTAATGGGCAATTTGTTTTAAGCATATTTTTAGTGATAGGAAGTGTTAAAGATAATTCCTCTGAATGTCGTATGTTTAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD115240             [    ACCGAGATGAGTCTAACCATCCACTGTTGAGACGTGCTTTTTGAACTAAATTCTTGGGTTTCATTAACCAGCTATCGGCAAACACTGCTTTCGCAGAACGTCTCAATGAACAGTCAGCATAGCGAGCGAAATCAACTCTTTCCTGATCTAACGAGTTGTCAGATTTAAATCGCATTATTGTACCAGCATTTGAATTCAATGTGTTATACGGATTAATTTTTTGTCCATCAACTGTAGGATAAGCTGAAGACGCAGATGAAGGGACCTTCGATTTAACAGAAGACTGATCATTTCTTGGATTGGGCAAACTTGTACCAGGACGTCGTAATCCCGGACGAACAGTAGGTAATGGGCAATTTGTTTTAAGCATATTTTTAGTGATAGGAAGTGTTAAAGATAATTCCTCTGAATGTCGTATGTTTAATTCTTTACATATATCCCGAACGACAGTAAACAACCGGGCGGCATAATTGGCACGAAGTACTAGAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD128117             [                                                                                                                                                                                                                                                                                                                                                                        TTTGTTTTAAGCATATTTTTAGTGATAGGAAGTGTTAAAGATAATTCCTCTGAATGTCGTATGTTTAATTCTTTACATATATCCCGAACGACAGTAAACAACCGGGCGGCATAATTGACACGAAGTACTAGAGGAGTTAAAGAGGGTAAAACAATTTGAACATCGTTATGCATACGATGAAACACCAATCTAGCATCCGACTGAATTCCATATTGATCCAATGTTGTCCGGCTCTGCAAAAGCCATACATTTCTATCGACCCACCATATTGCATGATCTGACCAACTTTGTTGTAACTTCACTTTTTCGACAATTAGATGCATCAAACCACCCAGTGGTAGATCACCCGAAACACGTACTGAAACATTTGTGTTTATGTCTTCAACGCGAACAGATAATTCCCAAGATCCATCAATATAATTTCCATCCACTACCATCCGACTGATAGTTTCTGTTCCATTGAAAGTATGAGTACCTCCATTATGGACACTAAATG                                                                                ]
[+] EMBL CD186413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGTAAAACAATTTGAACATCGTTATGCATACGATGAAACACCAATCTAGCATCCGACTGAATTCCATATTGATCCAATGTTGTCCGGCTCTGCAAAAGCCATACATTTCTATCGACCCACCATATTGCATGATCTGACCAACTTTGTTGTAACTTCACTTTTTCGACAATTAGATGCATCAAACCACCCAGTGGTAGATCACCCGAAACACGTACTGAAACATTTGTGTTTATGTCTTCAACGCGAACAGATAATTCCCAAGATCCATCAATATAATTTCCATCCACTACCATCCGACTGATAGTTTCTGTTCCATTGAAAGTATGAGTACCTCCATTATGGACACTAAATGGATCATATGCAGACATCGGTTAAAAGTACTTCACAAATTGCATGCACACGTAGTCCAGATAGTATCACTGACAATACCGA]


>consensus_6082#0 AGTGACCGAGATGAGTCTAACCATCCACTGTTGAGACGTGCTTTTTGAACTAAATTCTTG GGTTTCATTAACCAGCTATCGGCAAACACTGCTTTCGCAGAACGTCTCAATGAACAGTCA GCATAGCGAGCGAAATCAACTCTTTCCTGATCTAACGAGTTGTCAGATTTAAATCGCATT ATTGTACCAGCATTTGAATTCAATGTGTTATACGGATTAATTTTTTGTCCATCAACTGTA GGATAAGCTGAAGACGCAGATGAAGGGACCTTCGATTTAACAGAAGACTGATCATTTCTT GGATTGGGCAAACTTGTACCAGGACGTCGTAATCCCGGACGAACAGTAGGTAATGGGCAA TTTGTTTTAAGCATATTTTTAGTGATAGGAAGTGTTAAAGATAATTCCTCTGAATGTCGT ATGTTTAATTCTTTACATATATCCCGAACGACAGTAAACAACCGGGCGGCATAATTGGCA CGAAGTACTAGAGGAGTTAAAGAGGGTAAAACAATTTGAACATCGTTATGCATACGATGA AACACCAATCTAGCATCCGACTGAATTCCATATTGATCCAATGTTGTCCGGCTCTGCAAA AGCCATACATTTCTATCGACCCACCATATTGCATGATCTGACCAACTTTGTTGTAACTTC ACTTTTTCGACAATTAGATGCATCAAACCACCCAGTGGTAGATCACCCGAAACACGTACT GAAACATTTGTGTTTATGTCTTCAACGCGAACAGATAATTCCCAAGATCCATCAATATAA TTTCCATCCACTACCATCCGACTGATAGTTTCTGTTCCATTGAAAGTATGAGTACCTCCA TTATGGACACTAAATGGATCATATGCAGACATCGGTTAAAAGTACTTCACAAATTGCATG CACACGTAGTCCAGATAGTATCACTGACAATACCGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)