Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6085 cluster # 6085       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6085#0 length = 848 sequences # 4  
consensusID : consensus_6085#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 848
fasta sequence 
                              [ATAATAGCTATCATGGCTGGATACTTTGATCGATATCGAATATTTGCTTTGGCTATTTGTAGTAGTGGTGGTGGTTTCGGGACATTATTGTATACTCTTCTATGCAGTTATATGATTGAAAATCATACCTGGCGTATGGCCATAATTTCATTAGCTTTATTCCATCTAAATGTCATCCCTTTTAGTTTATTACACAAACCATTACCTCCTGAACCAATTTCAGAACCCGTTATCTTACTACCTAATGATCCAGTAGCGTCTACAATTTGTTTAAAATCTGTTACAGGCCCACCAAATACAAATGAATCATTTATAAGTACAACTGGTGGCAGTATACCAACCAGCATTGATAATATCATACAAAGAAATAAATCAGAGACAACACATTCACGGATAACCGGACAAGATATAATTGGAGTTGTGGAGTTTGTCAAAATTACCTATGACAAAACTAATTCAAATCAGATTACTGTTAGTCCAATCAATTTTGTCAACAACCCAGAACCACATTTATTAGAACGAATACAGACAATAGTTGATGATTATTTTGATAACGCGGAGAATATTACACCAGAAAGC-ACATCATATCATAGTCTCACGCTGTTTCTTCCAATCATATTTTTAGTATGTGATCAGCTGACCGACTTTAAAACCAATCTACCAGAGTCACAATTTCTAGTTGATAGTCATTTAAGTGGAATCGACAAATTATTCACTGATCATATTGCTCACACGGGATCAACTGCATTCATCAATTCACAAGCAAGTGTAGAACAAACACTTAGTGGAAATAAGTGTACAACTGCAACAACAGCGGCTCAGACAAAAACAAAAACAACAACTTGTTC]

[+] EMBL CD154101             [ATAATAGCTATCATGGCTGGATACTTTGATCGATATCGAATATTTGCTTTGGCTATTTGTAGTAGTGGTGGTGGTTTCGGGACATTATTGTATACTCTTCTATGCAGTTATATGATTGAAAATCATACCTGGCGTATGGCCATAATTTCATTAGCTTTATTCCATCTAAATGTCATCCCTTTTAGTTTATTACACAAACCATTACCTCCTGAACCAATTTCAGAACCCGTTATCTTACTACCTAATGATCCAGTAGCGTCTACAATTTGTTTAAAATCTGTTACAGGCCCACCAAATACAAATGAATCATTTATAAGTACAACTGGTGGCAGTATACCAACCAGCATTGATAATATCATACAAAGAAATAAATCAGAGACAACACATTCACGGATAACCGGACAAGATATAATTGGAGTTGTGGAGTTTGTCAAAATTACCTATGACAAAACTAATTCAAATCAGATTACTGTTAGTCCAATCAATTNTGTCAACAACCCAGAACCACATTTATTAGAACGAATACAGACAATAGTTGATGATTATTTTGATAACGCGGAGAATATTACACCAGAAAGC ACATCATATCATAGTCTCACGCTGNTTCTTC                                                                                                                                                                                                                                              ]
[+] EMBL AI975621             [                             TCGATATCGAATATTTGCTTTGGCTATTTGTAGTAGTGGTGGTGGTTTCGGGACATTATTGTATACTCTTCTATGCAGTTATATGATTGAAAATTATACCTGGCGTATGGCCATAATTTCATTAGCTTTATTCCATCTAAATGTCATCCCTTTTAGTTTATTACACAAACCATTACCTCCTGAACCAATTTCAGAACCCGTTATCTTACTACCTAATGATCCAGTAGCGTCTACAATTTGTTTAAAATCTGTTACAGGCCCACCAAATACAAATGAATCATTTATAAGTACAACTGGTGGCAGTATACCAACCAGCATTGATAATATCATACAAAGAAATAAATCAGAGACAACACATTCACGGATAACCGGACAAGATATAATTGGAGTTGTGGAGTTTGTCAAAATTACCTATGACAAAACTAATT AAATCAGATTACTGgt                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD119438             [                                                                                                                                                                                                                                                                               TAAAATCTGTTACAGGCCCACCAAATACAAATGAATCATTTATAAGTACAACTGGTGGCATTATACCAGCCAGCATTGATAATATCATACAAAGAAATAAATCAGAGACAACACATTCACGGATTTTCGGACAAGATATAATTGGAGTTGTGGAGTTTGTCAAAATTACCTATGACAAAACTAATTCAAATCAGATTACTGTTAGTCCAATCAATTTTGTCAACAACCCAGAACCACATTTATTAGAACGAATACAGACAATAGTTGATGATTATTTTGATAACGCGGAGAATATTACACCAGAAAGC ACATCATATCATAGTCTCACGCTGTTTnctc                                                                                                                                                                                                                                              ]
[-] EMBL CD115319             [                                                                                                                                                                                                                                                                                                                                                             ATAATATCATACAAAGAAATAAATCAGAGACAACACATTCACGGATAACCGGACAAGATATAATTGGAGTTGTGGAGTTTGTCAAAATTACCTATGACAAAACTAATTCAAATCAGATTACTGTTAGTCCAATCAATTTTGTCAACAACCCAGAACCACATTTATTAGAACGAATACAGACAATAGTTGATGATTATTTTGATAACGCGGAGAATATTACACCAG AAGCAACATCATATCATAGTCTCACGCTGTTTCTTCCAATCATATTTTTAGTATGTGATCAGCTGACCGACTTTAAAACCAATCTACCAGAGTCACAATTTCTAGTTGATAGTCATTTAAGTGGAATCGACAAATTATTCACTGATCATATTGCTCACACGGGATCAACTGCATTCATCAATTCACAAGCAAGTGTAGAACAAACACTTAGTGGAAATAAGTGTACAACTGCAACAACAGCGGCTCAGACAAAAACAAAAACAACAACTTGTTC]




>consensus_6085#0
ATAATAGCTATCATGGCTGGATACTTTGATCGATATCGAATATTTGCTTTGGCTATTTGT
AGTAGTGGTGGTGGTTTCGGGACATTATTGTATACTCTTCTATGCAGTTATATGATTGAA
AATCATACCTGGCGTATGGCCATAATTTCATTAGCTTTATTCCATCTAAATGTCATCCCT
TTTAGTTTATTACACAAACCATTACCTCCTGAACCAATTTCAGAACCCGTTATCTTACTA
CCTAATGATCCAGTAGCGTCTACAATTTGTTTAAAATCTGTTACAGGCCCACCAAATACA
AATGAATCATTTATAAGTACAACTGGTGGCAGTATACCAACCAGCATTGATAATATCATA
CAAAGAAATAAATCAGAGACAACACATTCACGGATAACCGGACAAGATATAATTGGAGTT
GTGGAGTTTGTCAAAATTACCTATGACAAAACTAATTCAAATCAGATTACTGTTAGTCCA
ATCAATTTTGTCAACAACCCAGAACCACATTTATTAGAACGAATACAGACAATAGTTGAT
GATTATTTTGATAACGCGGAGAATATTACACCAGAAAGCACATCATATCATAGTCTCACG
CTGTTTCTTCCAATCATATTTTTAGTATGTGATCAGCTGACCGACTTTAAAACCAATCTA
CCAGAGTCACAATTTCTAGTTGATAGTCATTTAAGTGGAATCGACAAATTATTCACTGAT
CATATTGCTCACACGGGATCAACTGCATTCATCAATTCACAAGCAAGTGTAGAACAAACA
CTTAGTGGAAATAAGTGTACAACTGCAACAACAGCGGCTCAGACAAAAACAAAAACAACA
ACTTGTTC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)