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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 639 cluster # 639       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_639#0 length = 220 sequences # 1  
consensus_639#1 length = 191 sequences # 1  

consensusID : consensus_639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 220
fasta sequence
                              [CAGGAAGTTAAACACAGTCAGGGCTTGGAGAAGAAAGAACTTGGAAAAAGACGATGGGGTGTGGACAACCAAGAGTTGGGCATTTTTGCCCCCATTTAATAGGATGTTCCAAAACCGGAGGGTCCATAACTTGCCCACAATTGAACACTTTTCTGGCAAACCGTAACTTAAGGGAAACCCCCATTGCGCGCGCAAAAACCCGGGAAAAAGAGATCACTAA]

[+] EMBL AI964703             [CAGGAAGTTAAACACAGTCAGGGCTTGGAGAAGAAAGAACTTGGAAAAAGACGATGGGGTGTGGACAACCAAGAGTTGGGCATTTTTGCCCCCATTTAATAGGATGTTCCAAAACCGGAGGGTCCATAACTTGCCCACAATTGAACACTTTTCTGGCAAACCGTAACTTAAGGGAAACCCCCATTGCGCGCGCAAAAACCCGGGAAAAAGAGATCACTAA]


>consensus_639#0 CAGGAAGTTAAACACAGTCAGGGCTTGGAGAAGAAAGAACTTGGAAAAAGACGATGGGGT GTGGACAACCAAGAGTTGGGCATTTTTGCCCCCATTTAATAGGATGTTCCAAAACCGGAG GGTCCATAACTTGCCCACAATTGAACACTTTTCTGGCAAACCGTAACTTAAGGGAAACCC CCATTGCGCGCGCAAAAACCCGGGAAAAAGAGATCACTAA



consensusID : consensus_639#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 191
fasta sequence
                              [ATGAGGAAGTTAAACACAGTGAGGGCTTGGAGAAGAAAGAACTGGAAAAAGACGATGGGTGTGGACAACCAAGATGTTGGGATTTTTGCTCTCATTTAATAGAATGTTTCAAAACTGGAGGTTCTAATACTTGGCCAAATGGAAACAATTCTTGCAAAACCGTAACATTAAGGAAAAACCCAATTATCTCT]

[+] EMBL AI964705             [ATGAGGAAGTTAAACACAGTGAGGGCTTGGAGAAGAAAGAACTGGAAAAAGACGATGGGTGTGGACAACCAAGATGTTGGGATTTTTGCTCTCATTTAATAGAATGTTTCAAAACTGGAGGTTCTAATACTTGGCCAAATGGAAACAATTCTTGCAAAACCGTAACATTAAGGAAAAACCCAATTATCTCT]


>consensus_639#1 ATGAGGAAGTTAAACACAGTGAGGGCTTGGAGAAGAAAGAACTGGAAAAAGACGATGGGT GTGGACAACCAAGATGTTGGGATTTTTGCTCTCATTTAATAGAATGTTTCAAAACTGGAG GTTCTAATACTTGGCCAAATGGAAACAATTCTTGCAAAACCGTAACATTAAGGAAAAACC CAATTATCTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_639#0      --CAGGAAGTTAAACACAGTCAGGGCTTGGAGAAGAAAGAACTTGGAAAAAGACGATGGG 58
consensus_639#1      ATGAGGAAGTTAAACACAGTGAGGGCTTGGAGAAGAAAGAACT-GGAAAAAGACGATGGG 59
                        ***************** ********************** ****************

consensus_639#0      GTGTGGACAACCAAGAGTTGGGCATTTTTGCCCCCATTTAATAGGATGTTCCAAAACCGG 118
consensus_639#1      -TGTGGACAACCAAGATGTTGGGATTTTTGCTCTCATTTAATAGAATGTTTCAAAACTGG 118
                      ***************  * ** ******** * ********** ***** ****** **

consensus_639#0      AGGGTCCATAACTTGCCCACAATTGAACACTTTTCTGGCAAACCGTAAC-TTAAGGGAAA 177
consensus_639#1      AGGTTCTAATACTTGGCCA-AATGGAAACAATTCTTGCAAAACCGTAACATTAAGGAAAA 177
                     *** ** *  ***** *** *** ***    **  **  ********** ****** ***

consensus_639#0      CCCCCATTGCGCGCGCAAAAACCCGGGAAAAAGAGATCACTAA 220
consensus_639#1      ACCCAATTATCTCT----------------------------- 191
                      *** ***                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)