Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6451 cluster # 6451       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6451#0 length = 976 sequences # 4  
consensusID : consensus_6451#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 976
fasta sequence 
                              [CGTCATCTAATTCGTTGGATGGCGGAGCATCTGATTAGACTGAACGCCTTTAGGTCTGGTTGGATGGTTTCTTTTGGGGGTTATGGTTGCGTGACGACTACCTCTTCGTGGTTCCCGCTAGTAACGTGGTGTCGAAAGATGCTGCGGCTAAAATGTCGTCGAGGCCTTCGGGTCTCCAGTTGGGCTGGTGTGCGCTGCGTACTATGATTAGCAGGGTAATATGCTACGGCCACATCTGACTTCTACCCATCTTGCATTGGTCAGTAATGGCTAGTGTGGTGGGGAAGCCCAGTCCAGGTTGCTGAACTATCGACCTGGTTTCGTGGAGCCAAACCTGTTGCTATGATCTGGCTGTCGTGGTATACTGGGTATTACCTGGTGCCATGGCCCATTACCGAGGAATTGCTAGGTCTCTGAAACTTGGATCTGACGGTTAGCTTTGGTGCTGTCTTGACTGGAAAGGGTACTTGTGCCCTCAA-GTTAGGATGGTGCTGGCTCGTGTCCGTATTGGTAACCAACAGCGCTTTAGGGGACAGATTATCGATTCTAGAGCTAATACATGCCTTGAGTACCTGAACCGCAAGGGGAGGGGCGCACTTATTAGATACTCTGGAGTGATGGTTGGTCTTCTGAGACGCCTAGGTTGCTGGGTGGCTGTCTATGGATGGTCATCGGGACCCTCGGGTCTCCAGTTGGGCTGTTGTGCGCCGCGAACGTAATAACATAGCAATATGTTACGGCCACACATGACTTCTACCCATCTTGCATTGGTTCGTAAGGACTAGTGCGGTGGGGAGGCTCAGTCTCGATTGGCAGAAATGCTGACCTGGACACGTGAAGTCTTTCACAGGGTAACATGTACGTTCTAACGGAACCTCCCGTAGCTGGAACTGCTCCTCCGGCTTAATGTGGGCCTTAGAGAGACCCGGGCATCCGGTAAAGACGGCAAGGGCTAGAAAATTGGTGGTGCAAACTG]

[+] EMBL CD161443             [CGTCATCTAATTCGTTGGATGGCGGAGCATCTGATTAGACTGAACGCCTTTAGGTCTGGTTGGATGGTTTCTTTTGGGGGTTATGGTTGCGTGACGACTACCTCTTCGTGGTTCCCGCTAGTAACGTGGTGTCGAAAGATGCTGCGGCTAAAATGTCGTCGAGGCCTTCGGGTCTCCAGTTGGGCTGGTGTGCGCTGCGTACTATGATTAGCAGGGTAATATGCTACGGCCACATCTGACTTCTACCCATCTTGCATTGGTCAGTAATGGCTAGTGTGGTGGGGAAGCCCAGTCCAGGTTGCTGAACTATCGACCTGGTTTCGTGGAGCCAAACCTGTTGCTATGATCTGGCTGTCGTGGTATACTGGGTATTACCTGGTGCCATGGCCCATTACCGAGGAATTGCTAGGTCTCTGAAACTTGGATCTGACGGTTAGCTTTGGTGCTGTCTTGACTGGAAAGGGTACTTGTGCCCTCAA GTTAGGATGGTGCTGGCTCGTGTCCGTATTGGTAACCAACAGCGCTTTAGGGGACAGATTATCGATTCTAGAGCTAATACATGCCTTGAGTACCTGAAC                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD097154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGGTGCTGTCTTGACTGGAAAGGGTACTTGTGCCCTCAAGGTTAGGATGGTGCTGGCTCGTGTCCGTATTGGTAACCAACAGCGCTTTAGGGGACTGATTATCGATTCTAGAGCTAATACATGCCTTGAGTACCTGAACCGCAAGGGGAGGGGCGCACTTATTAGATACTCTGGAGTGATGGTTGGTCTTCTGAGACGCCTAGGTTGCTGGGTGGCTGTCTATGGATGGTCATCGGGACCCTCGGGTCTCCAGTTGGGCTGTTGTGCGCCGCGAACGTAATAACATAGCAATATGTTACGGCCACACATGACTTCTACCCATCTTGCATTGGTTCGTAAGGACTAGTGCGGTGGGGAGGCTCAGTCTCGATTGGCAGAAATGCTGACCTGGACACGTGAAGTCTTTCACAGGGTAACATGTACGTTCTAACGGA                                                                                                       ]
[+] EMBL CD093325             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GACCCTCGGGTCTCCAGTTGGGCTGTTGTGCGCCGCGAACGTAATAACATAGCAATATGTTACGGCCACACATGACTTCTACCCATCTTGCATTGGTTCGTAAGGACTAGTGCGGTGGGGAGGCTCAGTCTCGATTGGCAGGAATGCTGACCTGGACACGTGAAGTCTTTCACAGGGTAACATGTACGTTCTAACGGAACCTCCCGTAGCTGGAACTGCTCCTCCGGCTTAATGTGGGCCTTAG                                                         ]
[+] EMBL BG932288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACGGCCACACATGACTTCTACCCATCTTGCATTGGTTCGTAAGGACTAGTGCGGTGGGGAGGCTCATTCTCGATTGGCAGAAATGCTGACCTGGACACGTGAAGTCTTTCACAGGGTAACATGTACGTTCTAACGGAACCTCCCGTAGCTGGAACTGCTCCTCCGGCTTAATGTGGGCCTTAGAGAGACCCGGGCATCCGGTAAAGACGGCAAGGGCTAGAAAATTGGTGGTGCAAACTG]




>consensus_6451#0
CGTCATCTAATTCGTTGGATGGCGGAGCATCTGATTAGACTGAACGCCTTTAGGTCTGGT
TGGATGGTTTCTTTTGGGGGTTATGGTTGCGTGACGACTACCTCTTCGTGGTTCCCGCTA
GTAACGTGGTGTCGAAAGATGCTGCGGCTAAAATGTCGTCGAGGCCTTCGGGTCTCCAGT
TGGGCTGGTGTGCGCTGCGTACTATGATTAGCAGGGTAATATGCTACGGCCACATCTGAC
TTCTACCCATCTTGCATTGGTCAGTAATGGCTAGTGTGGTGGGGAAGCCCAGTCCAGGTT
GCTGAACTATCGACCTGGTTTCGTGGAGCCAAACCTGTTGCTATGATCTGGCTGTCGTGG
TATACTGGGTATTACCTGGTGCCATGGCCCATTACCGAGGAATTGCTAGGTCTCTGAAAC
TTGGATCTGACGGTTAGCTTTGGTGCTGTCTTGACTGGAAAGGGTACTTGTGCCCTCAAG
TTAGGATGGTGCTGGCTCGTGTCCGTATTGGTAACCAACAGCGCTTTAGGGGACAGATTA
TCGATTCTAGAGCTAATACATGCCTTGAGTACCTGAACCGCAAGGGGAGGGGCGCACTTA
TTAGATACTCTGGAGTGATGGTTGGTCTTCTGAGACGCCTAGGTTGCTGGGTGGCTGTCT
ATGGATGGTCATCGGGACCCTCGGGTCTCCAGTTGGGCTGTTGTGCGCCGCGAACGTAAT
AACATAGCAATATGTTACGGCCACACATGACTTCTACCCATCTTGCATTGGTTCGTAAGG
ACTAGTGCGGTGGGGAGGCTCAGTCTCGATTGGCAGAAATGCTGACCTGGACACGTGAAG
TCTTTCACAGGGTAACATGTACGTTCTAACGGAACCTCCCGTAGCTGGAACTGCTCCTCC
GGCTTAATGTGGGCCTTAGAGAGACCCGGGCATCCGGTAAAGACGGCAAGGGCTAGAAAA
TTGGTGGTGCAAACTG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)