These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6521#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 522 fasta sequence [GTTTAATT-AATCAATCGATGTTGCACCAGTTGTGGAGCACAAGGATGAGTTTCTATCTA-TGTGCCTGTAGATCCACAATCTCATGAACTTATTCATAACCCTACTTATGAAGAATTGTTCGCACCATCTTTCGGTCCAGTCAATCCTTTTAAATCTGAAAAACAATTAGCTCCTAAAAATACTTTAACTGGATATGTCGAAGAGGCTCACGTTAATAAGTTTGCTTTTGAAAACCAGCATAGAACTTTTATGACTTATGGTTACGCAGAAGATCCTTCTGTTGAGGGAGGTGCTGATCGACGCTTAGTTGGAGAGCCAGAAAGTATGATGGAAAATGAAGGAAAAACTGCCTGTGAAAAGCGCCAGAAACTTAAAGGTGATCTGCGTAAACGTGATAGTAATTGGGATCCGACA-AGTGAAGATTATACTGGACCATGGGCTAAATATAAAGATGAAGTAACTGTTTCGGTTCCTTCTGAAGAGGATCGTGTTTATTTGGAAGCATATTTAGCAAAGAAAGCC] [+] EMBL CD065687 [GTTTAA T AATCAATCGATGTTGCACCAGTTGTGGAGCACAAGGATGAGTTTCTATCTA TGTGCCTGTAGATCCACAATCTCATGAACTTATTCATAACCCTACTTATGAAGAATTGTTCGCACCATCTTTCGGTCCAGTCAATCCTTTTAAATCTGAAAAACAATTAGCTCCTAAAAATACTTTAACTGGATATGTCGAAGAGGCTCACGTTAATAAGTTTGCTTTTGAAAACCAGCATAGAACTTTTATGACTTATGGTTACGCAGAAGATCCTTCTGTTGAGGGAGGTGCTGATCGACGCTTAGTTGGAGAGCCAGAAAGTATGATGGAAAATGAAGGAAAAACTGCCTGTGAAAAGCGCCAGAAACTTAAAGGTGATCTGCGTAAACGTGATAGTAATTGGGATCCGACA AGTGAAGATTATACTGGACCATGGGCTACATATAAAGATGAAGTAACTGTTTCGGTTCCTTCTGAAGAGGATCGTGTTTATTTGGAAGCATATTTAGCAAAGAAAGCC] [-] EMBL CD128197 [ TTTAATTAAATCAATCGATGTTGCACCAGTTGTGGAGCACAAGGATGAGTTTCTATCTATTGTGCCTGTAGATCCACAATCTCATGAACTTATTCATAACCCTACTTATGAAGAATTGTTCGCACCATCTTTCGGTCCAGTCAATCCTTTTAAATCTGAAAAACAATTAGCTCCTAAAAATACTTTAACTGGATATGTCGAAGAGGCTCACGTTAATAAGTTTGCTTTTGAAAACCAGCATAGAACTTTTATGACTTATGGTTACGCAGAAGATCCTTCTGTTGAGGGAGGTGCTGATCGACGCTTAGTTGGAGAGCCAGAAAGTATGATGGAAAATGAAGGAAAAACTGCCTGTGAAAAGCGCCAGAAACTTAAAGGTGATCTGCGTAAACGTGATAGTAATTGGGATCC ACAGAGTGAAGATTATACTGGACCATGGGCTAAATATAAAGATGAAGTAACTGTTTCGGTTCCTTCTGAAGAGGATCGTGTTTATTTGGAAGCATATTTAGC AAGAAgc ] [+] EMBL CD128225 [ gTTATTA AATCAATCGATGTTGCACCAGTTATGGAGCACAAGGATGAGTTTCTATCTA TGTGCCTGTAGATCCACAATCTCATGAACTTATTCATAACCCTACTTATGAAGAATTGTTCGCACCATCTTTCGGTCCAGTCAATCCTTTTAAATCTGAAAAACAATTAGCTCCTAAAAATACTTTAACTGGATATGTCGAAGAGGCTCACGTTAATAAGTTTGCTTTTGAAAACCAGCATAGAACTTTTATGACTTATGGTTACGCAGAAGATCCTTCTGTTGAGGGAGGTGCTGATCGACGCTTAGTTGGAGAGCCAGAAAGTATGATGGAAAATGAAGGAAAAACTGCCTGTGAAAAGCGCCAGAAACTTAAAGGTGATCTGCGTAAACGTGATAGTAATTGGGATCCGACA AGTGAAGATTATACTGGACCATGGGCTAAATATTAAGATGAAGTAACTGTTTCGGTTCCTTCTGAAGAGGATCGGGT ] [-] EMBL CD128370 [ CTTATTCATAACCCTACTTATGAAGAATTGTTCGCACCATCTTTCGGTCCAGTCAATCCTTTTAAATCTGAAAAACAATTAGCTCCTAAAAATACTTTAACTGGATATGTCGAAGAGGCTCACGTTAATAAGTTTGCTTTTGAAAACCAGCATAGAACTTTTATGACTTATGGTTACGCAGAAGATCCTTCTGTTGAGGGAGGTGCTGATCGACGCTTAGTTGGAGAGCCAGAAAGTATGATGGAAAATGAAGGAAAAACTGCCTGTGAAAAGCGCCAGAAACTTAAAGGTGATCTGCGTAAACGTGGTAGTAATTGGGATCCGACA AGTGAAGATTATACTGGACCATGGGCTAAATATAAAGATGAAGTAACTGTTTCGGTTCCTTCTGAAGAGGATCGTGTTTATTTGGAAGCATATTTAGCAAAGAAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||