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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6620 cluster # 6620       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6620#0 length = 503 sequences # 4  

consensusID : consensus_6620#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 503
fasta sequence
                              [GCGGCCCGCCCTGGGGGGTAAGA-ATTTCGACTCTAATCAACTCCAAATACATAAACAATACTTAATTTTGTATTATTGAAGCAGGAAAATACTTTTAATTGCTTGTTTGAGAAGTTGGAATTCCTGTTTCTCTCTCTCTCTCTTTATCTATGTATGTGTGTGTACTTCGTAGCTCAGGTTTGATCACAAAAATTTGCACGATTCAAAACTTTTTCACAAAGAAACAAATAACTACTAATTTCTTTTGTTATA-ACAAGTAATATTCACTTCGTATGAAATTTTCATGTTCAGGATTATTC-AATTAAATCAGTAAATGAGTACAACTATTCTAAGCAGGTAGTTTTCTCTATTAGAAAAATGAATCCATTTCTTCTGATTATCTCTCCTTTTACTTGCATAGCATAAATATATCATGTACAACCATTTATTTCTTTATTCATAGNATGTATCTAATAGTGTCAGTCTTATTTCACTCAAATTAATAATCTCTAGTACACAACACA]

[+] EMBL CD200796             [GCGGCCCGCCCTGGGGGGTAAGA ATTTCGACTCTAATCAACTCCAAATACATAAACAATACTTAATTTTGTATTATTGAAGCAGGAAAATACTTTAAATTGCTTGTTTGAGAAGTGGGAATCCCTGTCTCTCTCTCTCTCTCTTTATCTATGTATGTGGGTGCACTTCGAACCTCAGGTTGGATCACAAAAATTTGCACGATTCAAAACTTTTTCACAAAGAAACAAATAACTACTAATTTCTTTTGTTATA ACAAGTAATATTCACTTCGTATGAAATTTTCATGTTCAGGATTATTC AATTAAATCAGTAAATGAGTACAACTATTCTAAGCAGGTAGTTTTCTCTATTAGAAAAATGAATCCATTTCTTCTGATTATCTCTCCTTTTACTTGCATAGCATAAATATATCATGTACAACCATTTATTTCTTTATTCATAGNATGTATCTAATAGTGTCAGTCTTATTTCACTCAAATTAATAATCTCTAGTACAC      ]
[+] EMBL CD167170             [      gcgtattatGGGTAGGACAATTCGACTCTAATCAAATACAAGTACATGAACAATACTTAATTTTGTATTATTGAAGCAGGAAAATACTTTTAATTGCTTGTTTGAGAAGTTGGAATTCCTGTTTCTCTCTCTCTCTCTTTATCTATGTATGTGTGTGTACTTCGTAGCTCAGGTTTGATCACAAAAATTTGCACGATTCAAAACTTTTTCACAAAGAAACAAATAACTACTAATTTC TTTGTTATA ACAAGTAATATTCACTTCGTATGAGATTTTCATGTTCAGGATTATTC AATTAAATCAGTAAATGAGTACAACTATTCTAAGCAGGTAGTTTTCTCTATTAGAAAAATGAATCCATTTCTTCTGATTATCTCTTCTTTTACTTGCATAGCATAna                                                                                                 ]
[+] EMBL CD072163             [                                                  CATAAACAATACTTAATTTTGTATTATTGAAGCAGGAAAATACTTTTAATTGCTTGTTTGTGAAGTTGGAATTCCTGTTTCTCTCTCTCTCTCTTTATCTATGTATGTGTGTGTGCTTCGTAGCTCAGGTTTGATCACAAAAATTTGCACGATTCANAACTTTTTCACAAAGAAACAAATAACTACTAATTTCTTTTGTTATA ACAAGTAATATTCACTTCGTATGAAATTTTCATGTTCAGGATTATTCNAATTAAATCAGT AATGAGTACNACTAT                                                                                                                                                                                ]
[-] EMBL CD141543             [                                                                                                                                                                                                                                                    tnntgTATANNCAAGTAATA TCACTTCGTATGAAA TTTCATGTTCAGGATTATTC AATTAAATCAGTAAATGAGTACAACTATTCTAAGCAGGTAGTTTTCTCTATTAGAAAAATGAATCCATTTCTTCTGATTATCTCTCCTTTTACTNGCATAGCATAAATATATCATGTACAACCATTTATTTCTTTATTCATAGCATGTATCTAATAGTGTCAGTCTTATTTCACTCAAATTAATAATCTCTAGTACACAACACA]


>consensus_6620#0 GCGGCCCGCCCTGGGGGGTAAGAATTTCGACTCTAATCAACTCCAAATACATAAACAATA CTTAATTTTGTATTATTGAAGCAGGAAAATACTTTTAATTGCTTGTTTGAGAAGTTGGAA TTCCTGTTTCTCTCTCTCTCTCTTTATCTATGTATGTGTGTGTACTTCGTAGCTCAGGTT TGATCACAAAAATTTGCACGATTCAAAACTTTTTCACAAAGAAACAAATAACTACTAATT TCTTTTGTTATAACAAGTAATATTCACTTCGTATGAAATTTTCATGTTCAGGATTATTCA ATTAAATCAGTAAATGAGTACAACTATTCTAAGCAGGTAGTTTTCTCTATTAGAAAAATG AATCCATTTCTTCTGATTATCTCTCCTTTTACTTGCATAGCATAAATATATCATGTACAA CCATTTATTTCTTTATTCATAGNATGTATCTAATAGTGTCAGTCTTATTTCACTCAAATT AATAATCTCTAGTACACAACACA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)