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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6772 cluster # 6772       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6772#0 length = 797 sequences # 4  

consensusID : consensus_6772#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 797
fasta sequence
                              [TTNNTTTTTTAGTTTTGTTATGATCATATATTTACATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGAACGAGTCACA-CTTTGTGATGGAT-GAAGTAAACTGTTAACCATTT-CTTCGTCTGCTCCTGAAGCCCGATCAATGATCTCATTTCCATCCTCTTCTTCGAAGTTAGCACAAACACCAATTTGAAATGAGCTGAAATGTGGTCTGGCCGAGTTGCCCGTGTTCTGGCCCTCGGAAGTGTCTTGTCGATTCAAGCCGCGACTTGAAATTGGTGGATTGGTCATTATATCTCTCAGATGACTGTTAGCACCCTTAGGATCAAGCTCCATAGCCCATGAGTAATGAATCATTGCTTGTGGTGTATTCCCCAGTTTTTTGTAGGTATGACCAATCATCAAGTAAACCATGGCCTCACGTGGAGTTAAAACCAAAAGTTTTTGAAGCTCCGATAATACTTCAGAATAACGTCCAAGATGATATAAAATAGATGCTTTG]

[+] EMBL CD075532             [  NNTTTTTTAGTTTTGTTATGATCATATATTTACATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGAACGAGTCACA CTTTGTGATGGAT GAAGTAAACTGTTAACCATTT CTTCGTCTGCTCCTGAAGCCCGATCAATGATCTCATTTCCATCCTCTTCTTCGAAGTTAGCACAAACACCAATTTGAAATGAGCTGAAATGTGGTCTGGCCGAGTTGCCCGTGTTCTGGCCCTCGGAAGTGTCTTGTCGATTCAAGCCGCGACTTGAAATTGGTGGATTGGTCATTATATCTCTCAGATGACTGTTAGCACCCTTAGGATCAAGCTCCATAGCCCATGAGTAATGAATCATTGCTTGTGGTGTATTCCCCAGTTTTTTGTAGGTATGACCAATCATCAAGTAAACCATGGCCTCACGTGGAGTTAAAACCAAAAGTTTTTGAAGCTCCGATAATACTTCAGAATAACGTCCAAGATGATATAAAATAGATGCTTTG]
[+] EMBL AI395014             [ttttTTTTTTTTTTTTGTGATGATCATATATTTATATGAAAATTCGATACAACACATGTGCAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAGTAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCA TCAGTCGGCGAACTAAGTTTGAACGAGTCACACCTTTGTGATGGATGGAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL SM615                [                                                                                     TTTGAACCGAAACTTGNANATGTTTTATGNGGAAGTAAATAAGACTGNCCCAAATTAAGGGATGGAAATAAAAAGTGNTGTTTTATCAATATCACATNAGAATAGNTGGATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTAAGTTTGNACGAGTCACA CTTTGTGATGGAT GAAGTAAACTGTTTACCATTTCCTTCGTCTGCTCCTGAAGCC                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD138338             [                                                                                                                                                GGATGGAAATAAAAAGTGGTGTTTTATCAATATCACATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTATCAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAGGGTCCTGTTCATATCCTTCCATTTCATACAGTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_6772#0 TTNNTTTTTTAGTTTTGTTATGATCATATATTTACATGAAAATTCGATACAACACATGTG CAATAAAACTTTATACACGTTTGGCTTTGAATCGAAACTTGTATATGTTTTATGTGGAAG TAAATAAGACTGACCAAAATTAAGGGATGGAAATAAAAAGTGGTGTTTTATCAATATCAC ATAAGAATAGATGAATGCAATTGCTTCAATCGTCTGGTATGCTACGCTCAGTTCTGCTAT CAACTCCACCACTCAAATCCATCGTATCATAGTGCTCTTCATCTGCATCAGATATTACAG GGTCCTGTTCATATCCTTCCATTTCATACAGTAACGAGAAATCAGTCAGTCGGCGAACTA AGTTTGAACGAGTCACACTTTGTGATGGATGAAGTAAACTGTTAACCATTTCTTCGTCTG CTCCTGAAGCCCGATCAATGATCTCATTTCCATCCTCTTCTTCGAAGTTAGCACAAACAC CAATTTGAAATGAGCTGAAATGTGGTCTGGCCGAGTTGCCCGTGTTCTGGCCCTCGGAAG TGTCTTGTCGATTCAAGCCGCGACTTGAAATTGGTGGATTGGTCATTATATCTCTCAGAT GACTGTTAGCACCCTTAGGATCAAGCTCCATAGCCCATGAGTAATGAATCATTGCTTGTG GTGTATTCCCCAGTTTTTTGTAGGTATGACCAATCATCAAGTAAACCATGGCCTCACGTG GAGTTAAAACCAAAAGTTTTTGAAGCTCCGATAATACTTCAGAATAACGTCCAAGATGAT ATAAAATAGATGCTTTG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)