Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6807 cluster # 6807       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6807#0 length = 864 sequences # 4  

consensusID : consensus_6807#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 864
fasta sequence
                              [TTCTGTTGAACACCAGATAGAATACTTAATAGAACGATGAATATCATCTTCGGAAAACGACTTGATTACAAAGAATCTGGCCTTTTCTATGTGTGTGTCGAAATCATTGGGGTTGATTACTTTAGCCAAACGTTGGTGCAGCGCCTCTGACTCACGTTGAAAAGCCTGTGCAGATCCATCTGAGGTTAGTAGGGATGTTGAATTATTTGCAGAATGGTTACCATTATTTGAAGTACTCTTTAACTCAGGGTTAGACTCCGCTAAAGAACGTCCATTTCCTGACTGGTCCCCAGTATTGACTCGATCTTGTTGTGTTAAATGCCCATTATTACACGAAGCATTTGCCATCAAAGAATTAGCCCTGCCAACTGAATAGTTCCCAGTAGAAGGTTGGAAAGACCTGTTTGCAGCTGTTGGATTGTGAGGATGAGATCTTTTCG-CTGACCACCCTACAGAGTTTTGAATAACTGCAGCTGACCCTTTGGGTGGTTGTCCTGCTATATTAGCCCAAGTTTTAGTACGTGGTGAACTATTGACGGATGTAGCAATGACTGACGGTGCAGGTCTGTTACTAGCTGAAGTAGCCTGCCTACTTGCTGGATAACTACTTGGATTGGATTGTGATCTGGATATATTATCGGACTTATCCATAGAACACATGCTATTACCAATTCCATTATTTTCTTTCATATGAGACCATTGTGTTACTGAAGCATTATGTAACTGAACAGTACTTCCATTCCCAACAACTGAGGTTTCATAAAACGGGACTATGCAACTGATTTAGCCCACTATCACTACAAGTTGCTGCCTCGACACCACATCCAACATTTAGTCGACCGAATTCATCGATCAGTATTTGTG]

[+] EMBL CD165403             [TTCTGTTGAACACCAGATAGAATACTTAATAGAACGATGAATATCATCTTCGGAAAACGACTTGATTACAAAGAATCTGGCCTTTTCTATGTGTGTGTCGAAATCATTGGGGTTGATTACTTTAGCCAAACGTTGGTGCAGCGCCTCTGACTCACGTTGAAAAGCCTGTGCAGATCCATCTGAGGTTAGTAGGGATGTTGAATTATTTGCAGAATGGTTACCATTATTTGAAGTACTCTTTAACTCAGGGTTAGACTCCGCTAAAGAACGTCCATTTCCTGACTGGTCCCCAGTATTGACTCGATCTTGTTGTGTTAAATGCCCATTATTACACGAAGCATTTGCCATCAAAGAATTAGCCCTGCCAACTGAATAGTTCCCAGTAGAAGGTTGGAAAGACCTGTTTGCAGCTGTTGGATTGTGAGGATGAGATCTTTTCG CTGACCACCCTACAG                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD060713             [                                                                                                                                                                                           cgcAGGGATGTTGAATTATTTGCAGAATGGTTACCATTATTTGAAGTACTCTTTAACTCAGAGTTAGACTCCGCTAAAGAACGTCCATTTCCTGACTGGTCCCCAGTATTGACTCGATCTTGTTGTGTTAAATGCCCATTATTACACGAAGCATTTGCCATCAAAGAATTAGCCCTGCCAACTGAATAGTTCCCAGTAGAAGGTTGGAAAGACCTGTTTACAGCTGTTGGATTGTGAGGATGAGATCTTTTCG CTGACCACCCTACAGAGTTTTGAATAACTGCAGCTGACCCTTTGGGTGGTTGTCCTGCTATATTAGCCCAAGTTTTAGTACGTGGTGAACTATTGACGGATGTAGCAATGACTGACGGTGCAGGTCTGTTACTAGCTGAAGTAGCCTGC                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD165516             [                                                                                                                                                                                                                                                                                                                                      TATTACACGAAGCATTTGCCATCAAAGAATTAGCCCTGCCAACTGAATAGTTCCCAGTAGAAGGTTGGAAAGACCTGTTTGCAGCTGTTGGATTGTGAGGATGAGATCTTTTCGCCTGACCACCCTACAGAGTTTTGAATAAgaagc                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD069367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACTATTGACGGATGTAGCTATGACTGACGGTGCAGGTCTGTTACTAGCTGAAGTAGATAATCTACTTGCTGGATAACTACTTGGATTGGATTGTGATCTGGATATATTATCGGACTTATCCATAGAACACATGCTATTACCAATTCCATTATTTTCTTTCATATGAGACCATTGTGTTACTGAAGCATTATGTAACTGAACAGTACTTCCATTCCCAACAACTGAGGTTTCATAAAACGGGACTATGCAACTGATTTAGCCCACTATCACTACAAGTTGCTGCCTCGACACCACATCCAACATTTAGTCGACCGAATTCATCGATCAGTATTTGTG]


>consensus_6807#0 TTCTGTTGAACACCAGATAGAATACTTAATAGAACGATGAATATCATCTTCGGAAAACGA CTTGATTACAAAGAATCTGGCCTTTTCTATGTGTGTGTCGAAATCATTGGGGTTGATTAC TTTAGCCAAACGTTGGTGCAGCGCCTCTGACTCACGTTGAAAAGCCTGTGCAGATCCATC TGAGGTTAGTAGGGATGTTGAATTATTTGCAGAATGGTTACCATTATTTGAAGTACTCTT TAACTCAGGGTTAGACTCCGCTAAAGAACGTCCATTTCCTGACTGGTCCCCAGTATTGAC TCGATCTTGTTGTGTTAAATGCCCATTATTACACGAAGCATTTGCCATCAAAGAATTAGC CCTGCCAACTGAATAGTTCCCAGTAGAAGGTTGGAAAGACCTGTTTGCAGCTGTTGGATT GTGAGGATGAGATCTTTTCGCTGACCACCCTACAGAGTTTTGAATAACTGCAGCTGACCC TTTGGGTGGTTGTCCTGCTATATTAGCCCAAGTTTTAGTACGTGGTGAACTATTGACGGA TGTAGCAATGACTGACGGTGCAGGTCTGTTACTAGCTGAAGTAGCCTGCCTACTTGCTGG ATAACTACTTGGATTGGATTGTGATCTGGATATATTATCGGACTTATCCATAGAACACAT GCTATTACCAATTCCATTATTTTCTTTCATATGAGACCATTGTGTTACTGAAGCATTATG TAACTGAACAGTACTTCCATTCCCAACAACTGAGGTTTCATAAAACGGGACTATGCAACT GATTTAGCCCACTATCACTACAAGTTGCTGCCTCGACACCACATCCAACATTTAGTCGAC CGAATTCATCGATCAGTATTTGTG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)