Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6881 cluster # 6881       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6881#0 length = 825 sequences # 4  
consensusID : consensus_6881#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 825
fasta sequence 
                              [CAAGAGGATTAGTTCGAGCGTCGAAACGACGTTTGGTTGAATTGGAGCCGTCGGGAAACAGAACTCTTTTGACTTTATTAGCTGAACGATCAATACCCAGCCTGTGACGACGTGGACTACCTTCTACACCTGAAGAACTACTGTATCCAGAACCAGGTGTAAGCGTACCACCAGGTGTACTTGCGGGAGTAAGAGGAGTGAGTGGTAAAGTCCCTGGTTTCATTGGAGTATTTGATGGCGTGCTCGAAGGTGTTACATCTACAGAAGACGACTCATCACCACTATTTGGTAAAATAACAGTAGTGTTGGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACGATGTAGAAGTTAGGTCTTGCTTCCGTTTGGATGCTCTTGGAGGAGATGGCATTCTCAAATTGACATCTGTATCACCATGATGCCTGCGACCAGAACGAGAAATTTCGTTCAATTTTTCCCAATTCACAGATGACCAACCAGAACGTCCAGTAGTATCATGTTCTCTTACAACAGACTGACCAGACCAAGACCCAGAAAACGTAGAACTATCAGCATCCAATTTGCAGTTATTCGATAAAAGACCCAGTCTTTTTGCTCTATCAGCAGCAACTTCTACATACTGAGCTCCAATGTTCCCCTCAGAGGATTGAGTCAATTTTATTGACGAATTATTAGCACCATCAATAAAATTCATAGTATCATCATTTAGAGCAACACAATCCTTGTTTGCATTAGCATTTGTTGTTGTGTCCGATGATGTACCTTGAAACTCAGTATTGTCATTTCCACATACATTGCAGGTAT]

[-] EMBL CD163169             [CAAGAGGATTAGTTCGAGCGTCGAAACGACGTTTGGTTGAATTGGAGCCGTCGGGAAACAGAACTCTTTTGACTTTATTAGCTGAACGATCAATACCCAGCCTGTGACGACGTGGACTACCTTCTACACCTGAAGAACTACTGTATCCAGAACCAGGTGTAAGCGTACCACCAGGTGTACTTGCGGGAGTAAGAGGAGTGAGTGGTAAAGTCCCTGGTTTCATTGGAGTATTTGATGGCGTGCTCGAAGGTGTTACATCTACAGAAGACGACTCATCACCACTATTTGGTAAAATAACAGTAGTGTTGGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACGATGTAGAAGTTAGGTCTTGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD163096             [          AGTTCGAGCGTCGAAACGACGTTTGGTTGAATTGGAGCCGTCGGGAAACAGAACTCTTTTGACTTTATTAGCTGAACGATCAATACCCAGCCTGTGACGACGTGGACTACCTTCTACACCCGAAGAACTACTGTATCCAGAACCAGGTGTAAGCGTACCACCAGGTGTACTTGCGGGAGTAAGAGGAGTGAGTGGTAAAGTCCCTGGTTTCATTGGAGTATTTGATGGCGTGCTCGAAGGTGTTACATCTACAGAAGACGACTCATCACCACTATTTGGTAAAATAACAGTAGTGTTGGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACGATGTAGAAGTTAGGTCTTGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD146883             [                                                                                                                                                                                     TGCGGGAGTAAGAGGAGTGAGTGGTAAAGTCCCTGGTTTCATTGGAGTATTTGATGGCGTGCTCGAAGGTGTTACATCTACAGAAGACGACTCATCACCACTATTTGGTAAAATAACAGTAGTGTTGGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACGATGCAGAAGTTAGGTCTTGCTTCCGTTTGGATGCTCTTGGAGGAGATGGCATTCTCAAATTGACATCTGTATCACCATGATGCCTGCGACCAGAACGAGAAATTTCGTTCAATTTTTCCCAATTCACAGATGACCAACCAGAACGTCCAGTAGTATCATGTTCTCTTACAACAGACTGACCAGACCAAGACCCAGAAAACGTAGAACTATCAGCATCCAATTTGCAGTTATTCGATAAAAGACCCAGTCTTTTTGCTCTATCAGCAGCAACTTCTACATACTGAGCTCCAATGTTCCCCTCAGAGGATTGAGTCAATTTTATTGACGAATTATTAGCACCATCAATAAAATTCATAGTATCATCATTTAGAGCAACACAATCCTTGTTTGCATTAGCATTTGTTGTTGTGTCCGATGATGTACCTTGAAACTCAGTATTGTCATTTCCACATACATTGCAGGTAT]
[+] EMBL CD061021             [                                                                                                                                                                                                                                                                            CGACTCATCACCACTATTTGGTAAAATAACAGTAGTGTTTGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACGATGTAGAAGTTAGGTCTTGCTTGCGTTTGGATGCTCTCGGAGGAGATGGCATTCTCACATTGACATCTGTAT                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_6881#0
CAAGAGGATTAGTTCGAGCGTCGAAACGACGTTTGGTTGAATTGGAGCCGTCGGGAAACA
GAACTCTTTTGACTTTATTAGCTGAACGATCAATACCCAGCCTGTGACGACGTGGACTAC
CTTCTACACCTGAAGAACTACTGTATCCAGAACCAGGTGTAAGCGTACCACCAGGTGTAC
TTGCGGGAGTAAGAGGAGTGAGTGGTAAAGTCCCTGGTTTCATTGGAGTATTTGATGGCG
TGCTCGAAGGTGTTACATCTACAGAAGACGACTCATCACCACTATTTGGTAAAATAACAG
TAGTGTTGGAATTTTGTTCAGAAGATGAATCGGCTGCCGCGACTTCTGTGTCATTATACG
ATGTAGAAGTTAGGTCTTGCTTCCGTTTGGATGCTCTTGGAGGAGATGGCATTCTCAAAT
TGACATCTGTATCACCATGATGCCTGCGACCAGAACGAGAAATTTCGTTCAATTTTTCCC
AATTCACAGATGACCAACCAGAACGTCCAGTAGTATCATGTTCTCTTACAACAGACTGAC
CAGACCAAGACCCAGAAAACGTAGAACTATCAGCATCCAATTTGCAGTTATTCGATAAAA
GACCCAGTCTTTTTGCTCTATCAGCAGCAACTTCTACATACTGAGCTCCAATGTTCCCCT
CAGAGGATTGAGTCAATTTTATTGACGAATTATTAGCACCATCAATAAAATTCATAGTAT
CATCATTTAGAGCAACACAATCCTTGTTTGCATTAGCATTTGTTGTTGTGTCCGATGATG
TACCTTGAAACTCAGTATTGTCATTTCCACATACATTGCAGGTAT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)