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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6908 cluster # 6908       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6908#0 length = 1168 sequences # 4  

consensusID : consensus_6908#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1168
fasta sequence
                              [CTCGTGAACAGTTACTTGGTCACTCATTTCTAAAATTACCGCTCTCTGAATTAGATAAAGCTTATAAAGGGAAGTCGAAATTCTTGACATCAGAATGCAATATTACTTTGTATTTTACATGTCCCTATTGTATTGAAAGAAAAAAACAATCATTTGAATACTAATAATTCCAATCAGTCACTTCCAAAGACACTAGATTTGCCAACAGATGATCAGAAAGCCATTTCACCAAGTAAGCGTGCAATTGTCCATTGGGCGACATCTTTATCATCTCATCCCTACTTATGGTCTCCATCGTCTACAAAATCTAGAGACTTGAAGAAAGCAAGTGGTGTACATTGTGATGGGAGTCCTAGTTTAATACCCAAAGCAAATGTAACTGATGCATCCGGATGTCAAAACATTGGGGCACTCGATAAATCAAATAGTGTATTTTCACTAGGATCTTTACCATCATGTTCAGCTGTCAGTAATCATGATCGAGATGTCAGTTCAGATGAAGAAGAATATGATGACGATGATGACAATTACGACAGTGAGGAACACTACAGTGATTGTAATATTCATGTGGAGCACAAAACTACTTTCCCCGTTACTACCACTACTTCCCTATTGCGAAATACTAACAGTTCACCATCTTTATTGGCTCACAAAAGGAATTTTTCGTTAAGACATAGAACAGAAAAATTAAACACATCAATTAAATCAAATCAATCCGTTACTGATGTGATAAAAACGCCTAATAAAGTGGAGCTGACAAAACCAACTACTCCTGTTGTCCACTACTTTGTAAAACACCCACAATTGAGACGTCAATCATCAGAGGTTACATTAAATCATTCAGTTAGTTGATGAATATGTTTAAATGTGTGTATTTTTTGTGTGCAATTACTTTATAATTTTGTACAGAAGTGACTGCACCAATTCGTGTTTAAAGTTAACAATGAAAACTAAAAGGTGATAGCACATATGTGTATCTGACATCAAATCATTTATTTATCAAGAGACATATCAAGAAACATAATATTATTTTGAATGGATTCTTTATCTTATCAAAATGTATTTTATTAATTTGTATGCTTTTATACTTGTAAATATTTCACTGTTTTCTTTTGTTTTTGTATATTTAATTAACTTCCCTATACTGAAACCGACTNNTTCTGTGTAT]

[+] EMBL CD111117             [CTCGTGAACAGTTACTTGGTCACTCATTTCTAAAATTACCGCTCTCTGAATTAGATAAAGCTTATAAAGGGAAGTCGAAATTCTTGACATCAGAATGCAATATTACTTTGTATTTTACATGTCCCTATTGTATTGAAAGAAAAAAACAATCATTTGAATACTAATAATTCCAATCAGTCACTTCCAAAGACACTAGATTTGCCAACAGATGATCAGAAAGCCATTTCACCAAGTAAGCGTGCAATTGTCCATTGGGCGACATCTTTATCATCTCATCCCTACTTATTGTCTCCATCGTCTACAAAATCTAGAGACTTGAAGAAAGCAAGTGGTGTACATTGTGATGGGAGTCCTAGTTTAATACCCAAAGCAAATGTAACTGATGCATCCGGATGTCAGAACATTGGGGCACTCGATAAATCAAATAGTGTATTTTCACTAGGATCTTTACCATCATGTTCAGCTGTCAGTAATCATGATCGAGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD111526             [                                                                                                                                                    ATCATTTGAATACTAATAATTCCAATCAGTCACTTCCAAAGACACTAGATTTGCCAACAGATGATCAGAAAGCCATTTCACCAAGTAAGCGTGCAATTGTCCATTGGGCGACATCTTTATCATCTCATCCCTACTTATGGTCTCCATCGTCTACAAAATCTAGAGACTTGAAGAAAGCAAGTGGTGTACATTGTGATGGGAGTCCTAGTTTAATACCCAAAGCAAATGTAACTGATGCATCCGGATGTCAAAACATTGGGGCACTCGATAAATCAAATAGTGTATTTTCACTAGGATCTTTACCATCATGTTCAGCTGTCAGTAATCATGATCGAGATGTCAGTTCAGATGAAGAAGAATATGATGACGATGATGACAATTACGACAGTGAGGAACACTACAGTGATTGTAATATTCATGTGGAGCACAAAACTACTTTCCCCGTTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD111605             [                                                                                                                                                                                                                                                         CATTGGGCGACATCTTTATCATCTCATCCCTACTTATGGTCTCCATCGTCTACAAAATCTAGAGACTTGAAGAAAGCAAGTGGTGTACATTGTGATGGGAGTCCTAGTTTAATACCCAAAGCAAATGTAACTGATGCATCCGGATGTCAAAACATTGGGGCACTCGATAAATCAAATAGTGTATTTTCACTAGGATCTTTACCATCATGTTCAGCTGTCAGTAATCATGATCGAGATGTCAGTTCAGATGAAGAAGAATATGATGACGATGATGACAATTACGACAGTGAGGAACACTACAGTGATTGTAATATTCATGTGGAGCACAAAACTACTTTCCCCGTTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD080011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAATATGATGACGATGATGACAATTACGACAGTGAGGAACACTACAGTGATTGTAATATTCATGTGGAGCACAAAACTACTTTCCCCGTTACTACCACTACTTCCCTATTGCGAAATACTAACAGTTCACCATCTTTATTGGCTCACAAAAGGAATTTTTCGTTAAGACATAGAACAGAAAAATTAAACACATCAATTAAATCAAATCAATCCGTTACTGATGTGATAAAAACGCCTAATAAAGTGGAGCTGACAAAACCAACTACTCCTGTTGTCCACTACTTTGTAAAACACCCACAATTGAGACGTCAATCATCAGAGGTTACATTAAATCATTCAGTTAGTTGATGAATATGTTTAAATGTGTGTATTTTTTGTGTGCAATTACTTTATAATTTTGTACAGAAGTGACTGCACCAATTCGTGTTTAAAGTTAACAATGAAAACTAAAAGGTGATAGCACATATGTGTATCTGACATCAAATCATTTATTTATCAAGAGACATATCAAGAAACATAATATTATTTTGAATGGATTCTTTATCTTATCAAAATGTATTTTATTAATTTGTATGCTTTTATACTTGTAAATATTTCACTGTTTTCTTTTGTTTTTGTATATTTAATTAACTTCCCTATACTGAAACCGACTNNTTCTGTGTAT]


>consensus_6908#0 CTCGTGAACAGTTACTTGGTCACTCATTTCTAAAATTACCGCTCTCTGAATTAGATAAAG CTTATAAAGGGAAGTCGAAATTCTTGACATCAGAATGCAATATTACTTTGTATTTTACAT GTCCCTATTGTATTGAAAGAAAAAAACAATCATTTGAATACTAATAATTCCAATCAGTCA CTTCCAAAGACACTAGATTTGCCAACAGATGATCAGAAAGCCATTTCACCAAGTAAGCGT GCAATTGTCCATTGGGCGACATCTTTATCATCTCATCCCTACTTATGGTCTCCATCGTCT ACAAAATCTAGAGACTTGAAGAAAGCAAGTGGTGTACATTGTGATGGGAGTCCTAGTTTA ATACCCAAAGCAAATGTAACTGATGCATCCGGATGTCAAAACATTGGGGCACTCGATAAA TCAAATAGTGTATTTTCACTAGGATCTTTACCATCATGTTCAGCTGTCAGTAATCATGAT CGAGATGTCAGTTCAGATGAAGAAGAATATGATGACGATGATGACAATTACGACAGTGAG GAACACTACAGTGATTGTAATATTCATGTGGAGCACAAAACTACTTTCCCCGTTACTACC ACTACTTCCCTATTGCGAAATACTAACAGTTCACCATCTTTATTGGCTCACAAAAGGAAT TTTTCGTTAAGACATAGAACAGAAAAATTAAACACATCAATTAAATCAAATCAATCCGTT ACTGATGTGATAAAAACGCCTAATAAAGTGGAGCTGACAAAACCAACTACTCCTGTTGTC CACTACTTTGTAAAACACCCACAATTGAGACGTCAATCATCAGAGGTTACATTAAATCAT TCAGTTAGTTGATGAATATGTTTAAATGTGTGTATTTTTTGTGTGCAATTACTTTATAAT TTTGTACAGAAGTGACTGCACCAATTCGTGTTTAAAGTTAACAATGAAAACTAAAAGGTG ATAGCACATATGTGTATCTGACATCAAATCATTTATTTATCAAGAGACATATCAAGAAAC ATAATATTATTTTGAATGGATTCTTTATCTTATCAAAATGTATTTTATTAATTTGTATGC TTTTATACTTGTAAATATTTCACTGTTTTCTTTTGTTTTTGTATATTTAATTAACTTCCC TATACTGAAACCGACTNNTTCTGTGTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)