These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7028#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 537 fasta sequence [GAACAAATCACTCATTATTCACTGAGTGA-TTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACG-AATATTTG-AAATATACATCTCCTAGA-TGCAACTTCTATCCAACTTTTTA-TTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGATA-TACGAAGTTT-AATAGGCCGTATATTTCAC-TAGCATT-ATC-ATC-ATTC-AATC-ATATTGGGGTTAGACAATAGTCAC-TAAAAA-CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAA-CCGCC-TTCAACCTGCTAACCACATTTT-TCT-TCT--CTTCT-TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG-ATAATTGTATCTTC] [+] EMBL CD120002 [GAACAAATCACTCATTATTCACTGAGTGATTTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACGAAATATTTGAAAATATACATCTCCTAGACTGCAACTTCTATCCAACTTTTTACTTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGACACTACGAAGTTTAAATAGGCCGTATATTTAACTTAGCATTAATCAATCAATTCAAATCAATATTGGGGTTAGACAATAGTCACTTAAAAACCCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTT ] [+] EMBL CD120429 [ AATAAATCACTCATTATTCACTGAGTGA TTTTTGCAGCTACTCCTTTCTGCATCTACTTAATTTACACATTCACTTGTTCAGTTTATCCACTCACACG AATATTTG AAATATACATCTCCTAGA TGCAACTTCTATCCAACTTTTTA TTTCTCTGTTGTAGTAACGTTATTAGTCTTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TANAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAACCCGCCTTTCAACCTGCTAA CACATTTT TCT TCT CTNCTCTAAAAGGTATTTTCTTCTATATCNATTCATTCGCTGCTGTCA CAACTGNTACTAACTGGATGACAGACGTGTTACACGAATAATTGTATCTTC] [-] EMBL CD120061 [ tanTTAGTCTTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TAAAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCCTGTTACAGTTTAGACGAGAAGTTGGGAATGCTGGAACACCTTAGTATCTTTAG AAAATAATTCTAATTTTTCAGTCTCACAGAAA CCGCC TTCAACCTGCTAACCACATTTTCTATATCT CTTCT TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG ATAATTGTATCTTC] [-] EMBL CD120093 [ TTCAGAAGATA TACGAAGTTT AATAGGCCGTATATTTCAC TAGCATT ATC ATC ATTC AATC ATATTGGGGTTAGACAATAGTCAC TAAAAA CCTTTGACTTGTAGAGTAGTATGGTGTTGTGGTTTCGAATGTTCAAACTGTCTTGTTACAGTTTAGACGAGAAGTTGGAAATGCTGGAACACCTTAGTTTCTTTAGTTTTGTAATTCTAATTTTTCAGTCTCACAGAAA CCGCC TTCAACCTGCTAACCACATTTT CTT TCTCCCTTCT TAATAGTTATTTTCTTCTATATCATTTCATTCGCTGCTGTCACCAACTGTTACTAACTGAATGACAGACGTGTTACACG ATAATTGTATCTTC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||