Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7054 cluster # 7054       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7054#0 length = 960 sequences # 4  
consensusID : consensus_7054#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 960
fasta sequence 
                              [TCAGAGATAGCTTGACCATTAGTTCCTGTAGGAAACTGAAGAGAAGAATCGCTAGTATATGTAACGATATTTTCACGATTTTTTAAAAGTTCCGGTGATGTGAAAGTCAAAAATATTGATGTAGGTGTGTGAGGAATACAAACACCAAGGTCTGTATTACTGGATGAGATTGAGCTTGAATCACTTAATGAACGAGTGGATACCCCTTGTTGGTGAATAACATTTGAAGATACATTAGTCATCCCGCAATTTGTATCAGCGACTGAATTTCGAATGGAATTGAGATAGCTAGATGAACTAACTGTTGGCAAATCATCAAAATCTTTGGATGTTGCAAAAAACTTCTGATTTGTATCTAGATCAGCAATTTCCGATGTTTTATTTTCTTGGTCATTATTACTTGACGATATTTGAGTATGGTATTGTGAAGTGTTTAAAGAATGATAGTTAGATACCCTAGGAATGTCAGATAATCTTCTATATGAAAAGTGAGATGATGTAGTTAGTGGATAAGGACAGTAGGGATGATTGCTATAAAAATTGTTTGATAAACCAGATTTAACCTCAGCATTTGGGACGGTTAATAGTGCACCATAATTTGCTTTTGTAGTGTTCATACCGCTGTTATGATTGCCTGAGTGTGATCCAGAATTAGAAGCCTCCAAGAGCAAATCGTATTGACTATCTGAACCACCACAACCTGATAAGAACCCGGAAGAAGTCAATGAATGCGATGACGAATCTGATGTTATACGCTGTAAAGCACAGGAAAGATCCAAACCAAGATCGATCAGACAGTCAAACAATTTCGAACAAAGTCCATCATCCGTAGAACCCTGTTTTGCTGATGTGCTGGTTTCTTTAGATAATCCCTTGTATTTGTTTCGAATAGATGACAGTAACCACTTGCGGTCATCTTCGCTAAAGGACGTGTGAAGAATTGTTGCGATGAAAAGTTGA]

[+] EMBL CD093207             [TCAGAGATAGCTTGACCATTAGTTCCTGTAGGAAACTGAAGAGAAGAATCGCTAGTATATGTAACGATATTTTCACGATTTTTTAAAAGTTCCGGTGATGTGAAAGTCAAAAATATTGATGTAGGTGTGTGAGGAATACAAACACCAAGGTCTGTATTACTGGATGAGATTGAGCTTGAATCACTTAATGAACGAGTGGATACCCCTTGTTGGTGAATAACATTTGAAGATACATTAGTCATCCCGCAATTTGTATCAGCGACTGAATTTCGAATGGAATTGAGATAGCTAGATGAACTAACTGTTGGCAAATCATCAAAATCTTTGGATGTTGCAAAAAACTTCTGATTTGTATCTAGATCAGCAATTTCCGATGTTTTATTTTCTTGGTCATTATTACTTGACGATATTTGAGTATGGTATTGTGAAGTGTTTAAAGAATGATAGTTAGATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD181329             [                                                TCGCTAGTATATGTAACGATATTTTCACGATTTTTTAAAAGTTCCGGTGATGTGAAAGTCAAAAATATTGATGTAGGTGAGTGAGGAATACAAACACCAAGGTCTGTATTACTGGATGAGATTGAGCTTGAATCACTTAATGAACAAGTGGATACTCCTTGTTGGTGAATAACATTTGAAGATACATTAGTCATCCCGCAATTTGTATCAGCGACTGAATTTCGAATGGAATTGAGATAGCTAGATGAACTAACTGTTGGCAAATCATCAAAATCTTTGGATGTTGCANAAAACTTCTGATNTGTATCTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD062127             [                                                                                                                                                                                                                                                                                                                                                                                                                     GATATTTGAGTATGGTATTGTGAAGTGTTTAAAGAATGATAGTTAGATACCCTAGGAATGTCAGATAATCTTCTATATGAAAAGTGAGATGATGTAGTTAGTGGATAAGGACAGTAGGGATGATTGCTATAAAAATTGTTTGATAAACCAGATTTAACCTCAGCATTTGGGACGGTTAATAGTGCACCATAATTTGCTTTTGTAGTGTTCATACCGCTGTTATGATTGCCTGAGTGTGATCCAGAATTAGAAGCCTCCAAGAGCAAATCGTATTGACTATCTGAACCAC                                                                                                                                                                                                                                                                          ]
[-] EMBL CD180583             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACAGTAGGGATGATTGCTATAAAAATTGTTTGATAAACCAGATTTAACCTCAGCATTTGGGACGGTTAATAGTGCACCATAATTTGCTTTTGTAGTGTTCATACCGCTGTTATGATTGCCTGAGTGTGATCCAGAATTAGAAGCCTCCAAGAGCAGATCGTATTGACTATCTGAACCACCACAACCTGATAAGAACCCGGAAGAAGTCAATGAATGCGATGACGAATCTGATGTTATACGCTGTAAAGCACAGGAAAGATCCAAACCAAGATCGATCAGACAGTCAAACAATTTCGAACAAAGTCCATCATCCGTAGAACCCTGTTTTGCTGATGTGCTGGTTTCTTTAGATAATCCCTTGTATTTGTTTCGAATAGATGACAGTAACCACTTGCGGTCATCTTCGCTAAAGGACGTGTGAAGAATTGTTGCGATGAAAAGTTGA]




>consensus_7054#0
TCAGAGATAGCTTGACCATTAGTTCCTGTAGGAAACTGAAGAGAAGAATCGCTAGTATAT
GTAACGATATTTTCACGATTTTTTAAAAGTTCCGGTGATGTGAAAGTCAAAAATATTGAT
GTAGGTGTGTGAGGAATACAAACACCAAGGTCTGTATTACTGGATGAGATTGAGCTTGAA
TCACTTAATGAACGAGTGGATACCCCTTGTTGGTGAATAACATTTGAAGATACATTAGTC
ATCCCGCAATTTGTATCAGCGACTGAATTTCGAATGGAATTGAGATAGCTAGATGAACTA
ACTGTTGGCAAATCATCAAAATCTTTGGATGTTGCAAAAAACTTCTGATTTGTATCTAGA
TCAGCAATTTCCGATGTTTTATTTTCTTGGTCATTATTACTTGACGATATTTGAGTATGG
TATTGTGAAGTGTTTAAAGAATGATAGTTAGATACCCTAGGAATGTCAGATAATCTTCTA
TATGAAAAGTGAGATGATGTAGTTAGTGGATAAGGACAGTAGGGATGATTGCTATAAAAA
TTGTTTGATAAACCAGATTTAACCTCAGCATTTGGGACGGTTAATAGTGCACCATAATTT
GCTTTTGTAGTGTTCATACCGCTGTTATGATTGCCTGAGTGTGATCCAGAATTAGAAGCC
TCCAAGAGCAAATCGTATTGACTATCTGAACCACCACAACCTGATAAGAACCCGGAAGAA
GTCAATGAATGCGATGACGAATCTGATGTTATACGCTGTAAAGCACAGGAAAGATCCAAA
CCAAGATCGATCAGACAGTCAAACAATTTCGAACAAAGTCCATCATCCGTAGAACCCTGT
TTTGCTGATGTGCTGGTTTCTTTAGATAATCCCTTGTATTTGTTTCGAATAGATGACAGT
AACCACTTGCGGTCATCTTCGCTAAAGGACGTGTGAAGAATTGTTGCGATGAAAAGTTGA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)