Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7159 cluster # 7159       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7159#0 length = 906 sequences # 4  
consensusID : consensus_7159#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 906
fasta sequence 
                              [CTTTAGTTGGATATTTTTTTATAAATCACTATAGAAACCGATGTTCTTTGTTGACTATAGAATTTCGATTTAGAATGAATTGAAAAACAGAAATATTACAATTACCATTATTACCTGTTTTAAAACAAACGAGAAAAAGCAAACAATACCATCTATTATAACGTTTATTTAGAATCCGTTCTTTCTGTTACTCCTTATTGATATTACGTTTTCTTTCGAGGCTTTTTTGTTTGTTTTGTAACCACAGAGATATCTGTCGACTGCTAATACGACCACTGTTTGTTGATGTTTATATCATATCCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAATGATCATTGTGAAATGTCAAGATATGTTAGTATTGTATACATGTGCTTATTTCTAAAACTGTTTCCCTTCCCCCCTTACACTGGTTCTCTATTTATATGTATAGATATGGATATATCATTTGTTTGTTAAAAAAAAAAACTAACTTGGCATTTGTGAGAATTTTAGTTAAGTTACTATTACAATTATTTGTCTTCCTGCCAATGGACCTCATTGTTATATTACCAGCACTAAATCAATCTGGGAGGAAATATGAAAGAAAAAGAGTACTATTTGGTTCTACACTTACACAAATACACACACAGAAACATACATATATGCTTACAAAGTTATATATACAACTCAAGGTTGAATGAATAAGTTGAAACAATGAACTCAAATGATGTAATCACCTCCCAAAATAAATTTCATTTGCATATTTGCTTATAATGTTATTATTTATACTTAAAATTCTTTTCATTTTTGAGAAATACTTTCTTGTTACCATTATTTTCTATAATACTCCGTTTTTTTTTATTATTTCCAAGTATATTGTATACGATTAAAAT]

[+] EMBL CD200480             [CTTTAGTTGGATATTTTTTTATAAATCACTATAGAAACCGATGTTCTTTGTTGACTATAGAATTTCGATTTAGAATGAATTGAAAAACAGAAATATTACAATTACCATTATTACCTGTTTTAAAACAAACGAGAAAAAGCAAACAATACCATCTATTATAACGTTTATTTAGAATCCGTTCTTTCTGTTACTCCTTATTGATATTACGTTTTCTTTCGAGGCTTTTTTGTTTGTTTTGTAACCACAGAGATATCTGTCGACTGCTAGTACGACCACTGTTTGTTGATGTTTATATCATATCCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAATGATCATTGTGAAATGTCAAGATATGTTAGTATTGTATACATGTGCTTATTTCTAAAACTGTTTCCCacnccc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD089267             [                                                                                                                                                                                                                                                           ATCTGTCGACTGCTAATACGACCACTGTTTGTTGATGTTTATATCATATCCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAATGATCATTGTGAAATGTCAAGATATGTTAGTATTGTATACGTGTGCTTATTTCTAAAACTGTTTCCCTTCCCCCCTTACACTGGTTCTCTATTTATATGTATAGATATGGATATATCATTTGTTTGTTAAAAAAAAAAACTAACTTGGCATTTGTGAGAATTTTAGTTAAGTTACTATTACAATTATTTGTCTTCCTGCCAATGGACCTCATTGTTATATTACCAGCACTAAATCAATCTGGGAGGAAATATGAAAGAAAAAGAGTACTATTTGGTTCTACACTTACACAAATACACACACAGAAACATACATATATGCTTACAAAGTTATATATACAACTCAAGGTTGAATGAATAAGTTGAAACAATGAACTCAAATGATGTAATCACCTCCCAAAATAAATTTCATTTGCATATTTGCTTATAATGTTATTATTTATACTTAAAATTCTTTTCATTTTTGAGAAATACTTTCTTGTTACCATTATTTTCTATAATACTCCGTTTTTTTTTATTATTTCCAAGTATATTGTATACGATTAAAAT]
[+] EMBL CD089261             [                                                                                                                                                                                                                                                           ATCTGTCGACTGCTAATACGACCACTGTTTGTTGATGTTTATATCATATCCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAATGATCATTGTGAAATGTCAAGATACGTTAGTATTGTATACATGTGCTTATTTCTAAAACTGTTTCCCTTCCCCCCTTACACTGGTTCTCTATTTATATGTATAGATATGGATATATCATTTGTTTGTTAAAAAAAAAAACTAACTTGGCATTTGTGAGAATTTTAGTTAAGTTACTATTACAATTATTTGTCTTCCTGCCAATGGACCTCATTGTTATATTACCAGCACTAAATCAATCTGGGAGGAAATATGAAAGAAAAAGAGTACTATTTGGTTCTACACTTACACAAATACACACACAGAAACATACATATATGCTTACAAAGTTATATATACAACTCAAGGTTGAATGAATAAGTTGAAACAATGAACTCAAATGATGTAATCACCTCCCAAAAT AATTTCATTTGCATATTTGCTTATAATGTTATTATTTATACTTAAAATTCT                                                                                              ]
[+] EMBL CD089273             [                                                                                                                                                                                                                                                           ATCTGTCGACTGCTAATACGACCACTGTTTGTTGATGTTTATATCATATCCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAATGATCATTGTGAAATGTCAAGATATGTTAGTATTGTATACATGTGCTTATTTCTAAAACTGTTTCCCTTCCCCCCTTACACTGGTTCTCTATTTATATGTATAGATATGGATATATCATTTGTTTGTT AAAAAAAAAACTAACTTGGCATTTGTGAGAATTTTAGTTAAGTTACTATTACAATTATTTGTCTTCCTGCCAATGGACCTCATTGTTATATTACCAGCACTAAATCAATCTGGGAGGAAATATGAAAGAAAAAGAGTACTATTTGGTTCTACACTTACACAAATACACACACAGAAACATACATATATGCTTACAAAGTTATATATACAACTCAAGGTTGAATGAATAAGTTGAAACAATGAACTCAAATGATGTAATCACCTCCCAAAAAATAATTCATTTGCATATTTGCTTATAATGTTATTATTT                                                                                                            ]




>consensus_7159#0
CTTTAGTTGGATATTTTTTTATAAATCACTATAGAAACCGATGTTCTTTGTTGACTATAG
AATTTCGATTTAGAATGAATTGAAAAACAGAAATATTACAATTACCATTATTACCTGTTT
TAAAACAAACGAGAAAAAGCAAACAATACCATCTATTATAACGTTTATTTAGAATCCGTT
CTTTCTGTTACTCCTTATTGATATTACGTTTTCTTTCGAGGCTTTTTTGTTTGTTTTGTA
ACCACAGAGATATCTGTCGACTGCTAATACGACCACTGTTTGTTGATGTTTATATCATAT
CCCAAAAAATAAACAATATGCTTCTCTATATTTTTGTCTATCAATAAGTAATTTATGAAA
TGATCATTGTGAAATGTCAAGATATGTTAGTATTGTATACATGTGCTTATTTCTAAAACT
GTTTCCCTTCCCCCCTTACACTGGTTCTCTATTTATATGTATAGATATGGATATATCATT
TGTTTGTTAAAAAAAAAAACTAACTTGGCATTTGTGAGAATTTTAGTTAAGTTACTATTA
CAATTATTTGTCTTCCTGCCAATGGACCTCATTGTTATATTACCAGCACTAAATCAATCT
GGGAGGAAATATGAAAGAAAAAGAGTACTATTTGGTTCTACACTTACACAAATACACACA
CAGAAACATACATATATGCTTACAAAGTTATATATACAACTCAAGGTTGAATGAATAAGT
TGAAACAATGAACTCAAATGATGTAATCACCTCCCAAAATAAATTTCATTTGCATATTTG
CTTATAATGTTATTATTTATACTTAAAATTCTTTTCATTTTTGAGAAATACTTTCTTGTT
ACCATTATTTTCTATAATACTCCGTTTTTTTTTATTATTTCCAAGTATATTGTATACGAT
TAAAAT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)