Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7217 cluster # 7217       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7217#0 length = 1020 sequences # 5  
consensusID : consensus_7217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1020
fasta sequence 
                              [ATAATATAATTGCACTTCGTAATTAAGATAAAATTCATAAATTAAAGTCAAAATGCAGATAAAATGAAGTAAATCACTACATACAATTTAATTTAAAAAAGAAATTCAATGGATATTGTTGTAATTAAATTAAGTAATGTATAATGATGAAAATCTTTTTTATTGCAGTGCTAAAGCCATACAGGTACGGCTTGGCAGATATAGAAAAACACAATTTCGACGATTATCCCATGGTTCATTTCTGGTGAAAACATCAACAGATTGGTCGATTCGTTTAAAGCCACCAAATTCTTCTTGGTCAGAATCCAAAACAATATGATACTGTCCAGGTGTTTCGACTCCAATTTTGTAATCCGTAAAACTTTGAGTGGGATGAAAATTAAAGACAAACAAAACTCCAGCACGTTCAAACGCAATAACTTTATCGCCTTCATTCTTTCTACTAACATAGGCCTGTGGAGCTGCAAGCCAACCGTATCTTTCCTCTAAATGTTGCATAGCTCTGTCAAAGTTGTTTAGATATTTATAACGCAATAATGGATCATCTACCAAGTTCCACTGACGGCGAGCATAGTGATAGGAACTATTATTCCCAGCTCTTGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTCACCACCTAAGGTGTGTGTTATAAAA-CGTATTAAC-TTGTGTAATGCAATACCACGGTCAATAATTAAATTTGGAGGGCTTAAAGTGCTCATACTGAAGTACATTTCTTTGTCCATAAGCCAAAAGGATAATGTCTTATCACCAACCAAAGCTTGATCATGACATTCTGTGTATGCAATATTTGGTTCACCATAACGTCGATTAGTCAATGTATGGACGAGATTACCCATGTTCCAATCTTCATCTTTATATTTCTTTAGAAGCTCAATCCATTTATCAGGAATGGCCAAAGCTAATCGATAGTCGAATCCACCGCCGCCTTCGGAAACTGGACGAACACAGAGTAGGCATGATCCCGATAT]

[+] EMBL CD076632             [ATAATATAATTGCACTTCGTAATTAAGATAAAATTCATAAATTAAAGTCAAAATGCAGATAAAATGAAGTAAATCACTACATACAATTTAATTTAAAAAAGAAATTCAATGGATATTGTTGTAATTAAATTAAGTAATGTATAATGATGAAAATCTTTTTTATTGCAGTGCTAAAGCCATACAGGTACGGCTTGGCAGATATAGAAAAACACAATTTCGACGATTATCCCATGGTTCATTTCTGGTGAAAACATCAACAGATTGGTCGATTCGTTTAAAGCCACCAAATTCTTCTTGGTCAGAATCCAAAACAATATGATACTGTCCAGGTGTTTCGACTCCAATTTTGTAATCCGTAAAACTTTGAGTGGGATGAAAATTAAAGACAAACAAAACTCCAGCACGTTCAAACGCAATAACTTTATCGCCTTCATTCTTTCTACTAACATAGGCCTGTGGAGCTGCAAGCCAACCGTATCTTTCCTCTAAATGTTGCATAGCTCTGTCAAAGTTGTTTAGATATTTATAACGCAATAATGGATCATCTACCAAGTTCCACTGACGGCGAGCATAGTGATAGGAACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD083057             [                                                                                                                                                                                                           GAAAAACACAATTTCGACGATTATCCCATGGTTCATTTCTGGTGAAAACATCAACAGATTGGTCGATTCGTTTAAAGCCACCAAATTCTTCTTGGTCAGAATCCAAAACAATATGATACTGTCCAGGTGTTTCGACTCCAATTTTGTAATCCGTAAAACTTTGAGTGGGATGAAAATTAAAGACAAACAAAACTCCAGCACGTTCAAACGCAATAACTTTATCGCCTTCATTCTTTCTACTAACATAGGCCTGTGGAGCTGCAAGCCAACCGTATCTTTCCTCTAAATGTTGCATAGCTCTGTCAAAGTTGTTTAGATATTTATAACGCAATAATGGATCATCTACCAAGTTCCACTGACGGCGAGCATAGTGATAGGAACTATTATTCCCAGCTCTTGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTCACCACCTAAGGTGTGTGTTATAAAANCGTATTAACNTTGTGTAATGCAATACCACGGTCAATAATTAAATTTGGAGGGCTTAAAGTc                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD083528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTTCTACTAACATAGGCCTGTGGAGCTGCAAGCCAACCGTATCTTTCCTCTAAATGTTGCATAGCTCTGTCAAAGTTGTTTAGATATTTATAACGCAATAATGGATCATCTACCAAGTTCCACTGACGGCGAGCATAGTGATAGGAACTATTATTCCCAGCTCTTGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTCACCACCTAAGGTGTGTGTTATAAAA CGTATTAAC TTGTGTAATGCAATACCACGGTCAATAATTAAATTTGGAGGGCTTAAAGTGCTCATACTGAAGTACATTTCTTTGTCCATAAGCCAAAAGGATAATGTCTTATCACCAACCAAAGCTTGATCATGACATTCTGTGTATGCAATATTTGGTTCACCATAACGTCGATTAGTCAATGTATGGACGAGATTACCCATGTTCCc                                                                                                                              ]
[-] EMBL CD184830             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATAGTGATAGGAACTATTATTCCCAGCTCTTGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTCACCACCTAAGGTGTGTGTTATAAAA CGTATTAAC TTGTGTAATGCAATACCACGGTCAATAATTAAATTTGGAGGGCTTAAAGTGCTCATACTGAAGTACATTTCTTTGTCCATAAGCCAAAAGGATAATGTCTTATCACCAACCAAAGCTTGATCATGACATTCTGTGTATGCAATATTTGGTTCACCATAACGTCGATTAGTCAATGTATGGACGAGATTACCCATGTTCCAATCTTCATCTTTATATTTCTTTAGAAGCTCAATCCATTTATCAGGAATGGCCAAAGCTAATCGATAGTCGAATCCACCGCCGCCTTCGGAAACTGGACGAACACAGAGTAGGCATGATCCCGATA ]
[-] EMBL CD197511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGATAGGAACTATTATTCCCAGCTCTTGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTCACCACCTAAGGTGTGTGTTATAAAA CGTATTAAC TTGTGTAATGCAATACCACGGTCAATAATTAAATTTGGAGGGCTTAAAGTGCTCATACTGAAGTACATTTCTTTGTCCATAAGCCAAAAGGATAATGTCTTATCACCAACCAAAGCTTGATCATGACATTCTGTGTATGCAATATTTGGTTCACCATAACGTCGATTAGTCAATGTATGGACGAGATTACCCATGTTCCAATCTTCATCTTTATATTTCTTTAGAAGCTCAATCCATTTATCAGGAATGG CATAGCTAATCGATAGTCGAATCCACCGCCGCCTTCGGAAACTGGACG ACACAGAGTAGGCATGATCCC ATAT]




>consensus_7217#0
ATAATATAATTGCACTTCGTAATTAAGATAAAATTCATAAATTAAAGTCAAAATGCAGAT
AAAATGAAGTAAATCACTACATACAATTTAATTTAAAAAAGAAATTCAATGGATATTGTT
GTAATTAAATTAAGTAATGTATAATGATGAAAATCTTTTTTATTGCAGTGCTAAAGCCAT
ACAGGTACGGCTTGGCAGATATAGAAAAACACAATTTCGACGATTATCCCATGGTTCATT
TCTGGTGAAAACATCAACAGATTGGTCGATTCGTTTAAAGCCACCAAATTCTTCTTGGTC
AGAATCCAAAACAATATGATACTGTCCAGGTGTTTCGACTCCAATTTTGTAATCCGTAAA
ACTTTGAGTGGGATGAAAATTAAAGACAAACAAAACTCCAGCACGTTCAAACGCAATAAC
TTTATCGCCTTCATTCTTTCTACTAACATAGGCCTGTGGAGCTGCAAGCCAACCGTATCT
TTCCTCTAAATGTTGCATAGCTCTGTCAAAGTTGTTTAGATATTTATAACGCAATAATGG
ATCATCTACCAAGTTCCACTGACGGCGAGCATAGTGATAGGAACTATTATTCCCAGCTCT
TGGGAAATCCAACCATTCAGGATGACCAAACTCATTACCCATAAAGTTGAGATAACCTTC
ACCACCTAAGGTGTGTGTTATAAAACGTATTAACTTGTGTAATGCAATACCACGGTCAAT
AATTAAATTTGGAGGGCTTAAAGTGCTCATACTGAAGTACATTTCTTTGTCCATAAGCCA
AAAGGATAATGTCTTATCACCAACCAAAGCTTGATCATGACATTCTGTGTATGCAATATT
TGGTTCACCATAACGTCGATTAGTCAATGTATGGACGAGATTACCCATGTTCCAATCTTC
ATCTTTATATTTCTTTAGAAGCTCAATCCATTTATCAGGAATGGCCAAAGCTAATCGATA
GTCGAATCCACCGCCGCCTTCGGAAACTGGACGAACACAGAGTAGGCATGATCCCGATAT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)