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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7246 cluster # 7246       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7246#0 length = 1089 sequences # 5  

consensusID : consensus_7246#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1089
fasta sequence
                              [CATTACGTCGACTTAATCGTGATTCAAGAAAGGATCAACTACGTAATATGATTTTATCGTCTAATGATTGTAAATTATCACCAACTAGTATAAACAGTAATAGTACAATAATAAAGAATAATGAAATGATTAATTCATTTAATGAAAATACACAAACTATACGAAATTTATCAACAAATCTTATAAATGGTAATAATAAATACAATCGTGGTACATTATCAGTTGGTCAACGTGGTCGGCCTCCAGGTTCAGGTAGAAGACAAAAATCTATGAATTGTTCCAAATTAAATGAGAATGTGGATTTTTTAAATCAAGATACAATAACGAATGGAAATTTGAAAGCGGAAGGAAATGCAGTTTATCCAGTTACAAATTATCAGACAACATTGTCTGATCAGCAGAAAGCTTTCTTGAATGAGATGTTACTGTCAGCCGCTGCAGCAGTATCTGCATCAACAGTCAGTGTATCAAAAAGTGACAATCGATTGAATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACTTCATCTCCGTCATTTTTTGCATCACCTACATTACTAGGACAATTACCGTCAAATGATTCAAATCCTACAAAATCACCATTTACATTGTTGAATAGTATTACGGGACTACCAAATATACCGTTTCAACTACCAGTGAATACGCCACAAATCAATTGTTCATCTGGAACGACAACATCAATACCAACATCAGGTATTCATGAATTATCACCATCATCCAGTTCTGGTCTGGGTTTAAGTAGTGTAAATAGTCCATTTGAAACGTCAACAATTACAGTCACTACATTGGCTAACACTGTCTTCATGTCATCACCATCATCCTCTTCCTCGCCTACTAATTCTCTGGGATATCGTAGTATTACATCACCGNGTGGTTGTAGTAGTGGAGGACAATCAAATATTAATATAAGAAAATATCTATTGTCGAATATGCGAACGACACATANNAGCCAAGGAATTC-ATCATTTACATANCAATAATATTCTGATGAAT-GACCATCCTTAAATTTGATGGATTCCTGTAATAGCGGTAGCCAAGAAGTTACAAATTTACCATTGAACAT]

[-] EMBL CD152453             [CATTACGTCGACTTAATCGTGATTCAAGAAAGGATCAACTACGTAATATGATTTTATCGTCTAATGATTGTAAATTATCACCAACTAGTATAAACAGTAATAGTACAATAATAAAGAATAATGAAATGATTAATTCATTTAATGAAAATACACAAACTATACGAAATTTATCAACAAATCTTATAAATGGTAATAATAAATACAATCGTGGTACATTATCAGTTGGTCAACGTGGTCGGCCTCCAGGTTCAGGTAGAAGACAAAAATCTATGAATTGTTCCAAATTAAATGAGAATGTGGATTTTTTAAATCAAGATACAATAACGAATGGAAATTTGAAAGCGGAAGGAAATGCAGTTTATCCAGTTACAAATTATCAGACAACATTGTCTGATCAGCAGAAAGCTTTCTTGAATGAGATGTTACTGTCAGCCGCTGCAGCAGTATCTGCATCAACAGTCAGTGTATCAAAAAGTGACAATCGATTGAATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACCTCATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD114585             [                                                                                                                                                                                                               GTGGTACATTATCAGTTGGTCAACGTGGTCGGCCTCCAGGTTCAGGTAGAAGACAAAAATCTATGAATTGTTCCAAATTAAATGAGAATGTGGATTTTTTAAATCAAGATACAATAACGAATGGAAATTTGAAAGCGGAAGGAAATGCAGTTTATCCAGTTACAAATTATCAGACAACATTGTCTGATCAGCAGAAAGCTTTCTTGAATGAGATGTTACTGTCAGCCGCTGCAGCAGTATCAGCATCAACAGTCAGTGTATCAAAAAGTGACAATCGATTGGATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACTTCATCTCCGTCATTTTTTGCATCACCTACATTACTAGGACAATTACCGTCAAATGATTCAAATCCTACAAAATCACCATTTACATTGTTGAATAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD114533             [                                                                                                                                                                                                               GTGGTACATTATCAGTTGGTCAACGTGGTCGGCCTCCAGGTTCAGGTAGAAGACAAAAATCTATGAATTGTTCCAAATTAAATGAGAATGTGGATTTTTTAAATCAAGATACAATAACGAATGGAAATTTGAAAGCGGAAGGAAATGCAGTTTATCCAGTTACAAATTATCAGACAACATTGTCTGATCAGCAGAAAGCTTTCTTGAATGAGATGTTACTGTCAGCCGCTGCAGCAGTATCAGCATCAACAGTCAGTGTATCAAAAAGTGACAATCGATTGGATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACTTCATCTCCGTCATTTTTTGCATCACCTACATTACTAGGACAATTACCGTCAAATGATTCAAATCCTACAAAATCACCATTTACATTGTTGAATAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD125551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCATCAACAGTCAGTGTATCAAAAAGTGACAATCGATTGAATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACTTCATCTCCGTCATTTTTTGCATCACCTACATTACTAGGACAATTACCGTCAAATGATTCAAATCCTACAAAATCACCACTTACATTGTTGAATAATATTACGGGACTACCAAATATACCGTTTCAACTACCAGTGAATACGCCACAAATCAATTGTTCATCTGGAACGACAACATCAATACCAACATCAGGTATTCATGAATTATCACCATCATCCAGTTCTGGTCTGGGTTTAAGTAGTGTAAATAGTCCATTTGAAACGTCAACAATTACAGTCACTACATTGGCTAACACTGTCTTCATGTCATCACCATCATCCTCTTCCTCGCCTACTAATTCTCTGGGATATCGTAGTATTACATCACCGNGTGGTTGTAGTAGTGGAGGACAATCAAATATTAATATAAGAAAATATCTATTGTCGAATATGCGAACGACACATANNAGCCAAGGAATTC ATCATTTACATANCAATAATATTCTGATGAAT GACCATCCTTAAATTTGATGGAT                                               ]
[+] EMBL CD117405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGAATTATCACCATCATCCAGTTCTGGTCTGGGTTTAAGTAGTGTAAATAGTCCATTTGAAACATCAACAATTACAGTCACTACATTGGCTAACACTGTCTTCATGTCATCACCATCATCCTCTTCCTCGCCTACTAATTCTCTGGGATATCGTAGTATTACATCACCGGATGGTTGTAGTAGTGGAGGACAATCAAATATTAATATAAGAAATAATCTATTGTCGAATATGCGAACGACACATAAAAGCCAA GAATTCAATCATTTACATACAAATAATATTCTGATGAATGGACAATCTTTAAATTTGATGGATTCCTGTAATAGCGGTAGCCAAGAAGTTACAAATTTACCATTGAACAT]


>consensus_7246#0 CATTACGTCGACTTAATCGTGATTCAAGAAAGGATCAACTACGTAATATGATTTTATCGT CTAATGATTGTAAATTATCACCAACTAGTATAAACAGTAATAGTACAATAATAAAGAATA ATGAAATGATTAATTCATTTAATGAAAATACACAAACTATACGAAATTTATCAACAAATC TTATAAATGGTAATAATAAATACAATCGTGGTACATTATCAGTTGGTCAACGTGGTCGGC CTCCAGGTTCAGGTAGAAGACAAAAATCTATGAATTGTTCCAAATTAAATGAGAATGTGG ATTTTTTAAATCAAGATACAATAACGAATGGAAATTTGAAAGCGGAAGGAAATGCAGTTT ATCCAGTTACAAATTATCAGACAACATTGTCTGATCAGCAGAAAGCTTTCTTGAATGAGA TGTTACTGTCAGCCGCTGCAGCAGTATCTGCATCAACAGTCAGTGTATCAAAAAGTGACA ATCGATTGAATGGAAGCTTCATTAATCAAACATCATCACCTGCAGCAACTTCATCTCCGT CATTTTTTGCATCACCTACATTACTAGGACAATTACCGTCAAATGATTCAAATCCTACAA AATCACCATTTACATTGTTGAATAGTATTACGGGACTACCAAATATACCGTTTCAACTAC CAGTGAATACGCCACAAATCAATTGTTCATCTGGAACGACAACATCAATACCAACATCAG GTATTCATGAATTATCACCATCATCCAGTTCTGGTCTGGGTTTAAGTAGTGTAAATAGTC CATTTGAAACGTCAACAATTACAGTCACTACATTGGCTAACACTGTCTTCATGTCATCAC CATCATCCTCTTCCTCGCCTACTAATTCTCTGGGATATCGTAGTATTACATCACCGNGTG GTTGTAGTAGTGGAGGACAATCAAATATTAATATAAGAAAATATCTATTGTCGAATATGC GAACGACACATANNAGCCAAGGAATTCATCATTTACATANCAATAATATTCTGATGAATG ACCATCCTTAAATTTGATGGATTCCTGTAATAGCGGTAGCCAAGAAGTTACAAATTTACC ATTGAACAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)