Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7248 cluster # 7248       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7248#0 length = 849 sequences # 5  
consensusID : consensus_7248#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 849
fasta sequence 
                              [TCTGTCTAATGTGTTAAAAGATAAGTGATGATGACAAAAAAAAGGTTATTGGGATTAAAAATATAAAGAAGGTTTACCGTAATAAACAAAATTAATTTAAAGGAAGCTTTAATTGTGAAAAATAGAAAATAAATAACTGCTGCTTAAAAACAATTTTTTTTGTTTTAAGCTTAACTGCGACCTACAAAAGATTGAAATATATCAATTCTGAACATCGGGTGGTGAGAGAGGAGCTGCCAAAACTTTCTCATGTAACCGGAATCGATCAACTATTAATGGTCTAACATCATCGACTTTAGTTATTTCTTTTAAAAACGGAATAAGTTTAAGGAGTTCACAATCATTTGAATCAACAAACCAACTCTCAATTGGAACACCATTATCCAACTGATAGCCAAACGCCTGAGGAGAATTATCAATAATCACAGTTTTGCGGAGGTCTCGGCCTAGGACTCGTAAGTCTTTGACGTAATTACCATTTACACAGACACAGTGTTCACGGAATAATCTATGCTTGATCCATTTCTTTTTAGGATCGATCAAGTTTACAAGACGATCAGCGTATACTTTCGTGCTAGCTGTAAAAAGCACAACTTCGAAGTGTTCAGATACATTGGTAAGAAATTCGTATAAGTGTGGTCGAATTCGGACGTACACCATGTAGACAACACCTTGAANAACAACTTGGAAAATAAACTGAGCGTCCAAAAGAGGGTTCAGACTACAATGAACCANAGTTTCATCTAAATCAAGAACTANAGC-AAACTCTGGAGGGGAGCGTGTTTTTTTCGGCAGCGCTGGTGGACGACAAATAATATCNAGAGGCAGTGGTGNGAGGCTGCGGATGAA]

[+] EMBL CD180544             [TCTGTCTAATGTGTTAAAAGATAAGTGATGATGACAAAAAAAAGGTTATTGGGATTAAAAATATAAAGAAGGTTTACCGTAATAAACAAAATTAATTTAAAGGAAGCTTTAATTGTGAAAAATAGAAAATAAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD095282             [                                                               TAAAGAAGGTTTACCGTAATAAACAAAATTAATTTAAAGGAAGCTTTAATTGTGAAAAATAGAAAATAAATAACTGCTGCTTAAAAACAATTTTTTTTGTTTTAAGCTTAACTGCGACCTACAAAAGATTGAAATATATCAATTCTGAACATCGGGTGGTGAGAGAGGAGCTGCCAAAACTTTCTCATGTAACCGGAATCGATCAACTATTAATGGTCTAACATCATCGACTTTAGTTATTTCTTTTAAAAACGGAATAAGTTTAAGGAGTTCACAATCATTTGAATCAACAAACCAACTCTCAATTGGAACACCATTATCCAACTGATAGCCAAACGCCTGAGGAGAATTATCAATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD125519             [                                                                                                                                                          aTTTTTTGTTTTAAGCTTAACTGCGACCTACAAAAGATTGAAATATATCAGTTCTGAACATCGGGTGGTGAGAGAGGAGCTGCCAGAACTTTCTCATGTAACCGGAATCGATCAACTATTAATGGTCTAACATCATCGACTTTAGTTATTTCTTTTAAGAACGGAATAAGTTTAAGGAGTTCACAATCATTTGAATCAACAAACCAACTCTCAATTGGAACACCATTATCCAACTGATAGCCAAACGCCTGAGGAGAATTATCAATAATCACAGTTTTGCGGAGGTCTCGGCCTAGGACTCGTAAGTCTTTAACGTAATTACCATTTACACAGACACAGTGTTCACGGAATAATCTATGCTTGATCCATTTCTTTTTAGGATCGATCAAGTTTACAAGACGATCAGCGTATACTTTCGTGCTAGCTGTAAAAAGCACAACTTCGAAGTGTTCAGATACATTGGTAAGAAATTCGTATAAGTGTGGTCGAATTCGGACGTACACCATGTAGACAACACCTTGAANAACAACTTGGAAAATAAACTGAGCGTCCAAAAGAGGGTTCAGACTACAATGAACCANAGTTTCATCTAAATCAAGAACTANAGC AAACTCTGGAGGGGAGCGT                                                                    ]
[+] EMBL CD182574             [                                                                                                                                                                                                                                                                                                                                                                                                                                   TAATCACAGTTTTGCGGAGGTCTCGGCCTAGGACTCGTAAGTCTTTGACGTAATTACCATTTACACAGACACAGTGTTCACGGAATAATCTATGCTTGATCCATTTCTTTTTAGGATCGATCAAGTTTACAAGACGATCAGCGTATACTTTCGTGCTAGCTGTAAAAAGCACAACTTCGAAGTGTTCAGATACATTGGTAAGAAATTCGTATAAGTGTGGTCGAATTCGGACGTACGCCATGTAGACAAC                                                                                                                                                                                     ]
[+] EMBL CD181736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTAGGACTCGTAAGTCTTTGACGTAATTACCATTTACACAGACACAGTGTTCACGGAATAATCTATGCTTGATCCATTTCTTTTTAGGATCGATCAAGTTTACAAGACGATCAGCGTATACTTTCGTGCTAGCTGTAAAAAGCACAACTTCGAAGTGTTCAGATACATTGGTAAGAAATTCGTATAAGTGTGGTCGAATTCGGACGTACACCATGTAGACAACACCTTGAAAAACAACTTGGAAAATAAACTGAGCGTCCAAAAGAGGGTTCAGACTACAATGAACCAAAGTTTCATCTAAATCAAGAACTA AGCAAAACTCTGGAGAGGAGCGTGTTTTTTTCGGCAGCGCTGGTGGACGACAAATAATATCNAGAGGCAGTGGTGNGAGGCTGCGGATGAA]




>consensus_7248#0
TCTGTCTAATGTGTTAAAAGATAAGTGATGATGACAAAAAAAAGGTTATTGGGATTAAAA
ATATAAAGAAGGTTTACCGTAATAAACAAAATTAATTTAAAGGAAGCTTTAATTGTGAAA
AATAGAAAATAAATAACTGCTGCTTAAAAACAATTTTTTTTGTTTTAAGCTTAACTGCGA
CCTACAAAAGATTGAAATATATCAATTCTGAACATCGGGTGGTGAGAGAGGAGCTGCCAA
AACTTTCTCATGTAACCGGAATCGATCAACTATTAATGGTCTAACATCATCGACTTTAGT
TATTTCTTTTAAAAACGGAATAAGTTTAAGGAGTTCACAATCATTTGAATCAACAAACCA
ACTCTCAATTGGAACACCATTATCCAACTGATAGCCAAACGCCTGAGGAGAATTATCAAT
AATCACAGTTTTGCGGAGGTCTCGGCCTAGGACTCGTAAGTCTTTGACGTAATTACCATT
TACACAGACACAGTGTTCACGGAATAATCTATGCTTGATCCATTTCTTTTTAGGATCGAT
CAAGTTTACAAGACGATCAGCGTATACTTTCGTGCTAGCTGTAAAAAGCACAACTTCGAA
GTGTTCAGATACATTGGTAAGAAATTCGTATAAGTGTGGTCGAATTCGGACGTACACCAT
GTAGACAACACCTTGAANAACAACTTGGAAAATAAACTGAGCGTCCAAAAGAGGGTTCAG
ACTACAATGAACCANAGTTTCATCTAAATCAAGAACTANAGCAAACTCTGGAGGGGAGCG
TGTTTTTTTCGGCAGCGCTGGTGGACGACAAATAATATCNAGAGGCAGTGGTGNGAGGCT
GCGGATGAA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)