Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7296 cluster # 7296       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7296#0 length = 774 sequences # 5  
consensusID : consensus_7296#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 774
fasta sequence 
                              [ACTCGTTTCCTTAATCGCATCCTACTATTCCCTAGGGCCTCGTACTCCTACGTATCAGACAGTGAGTTTAATTAATAAAGGTACCTCATAGAGAAGGAGTATAAATACCTAATCATCCAATTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGAGGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAACTTCATTATCTGAAAAAATCAAGTCCATTAAAATAATGTTATTAGTCTGAGCACATGTTGAGAGAAAAACGATGTAATATGAAATCACAAATCTCAATACACTGACATAACTAGAA--TTATGAACTCAAACTATAAAGAAACGTGGGGAATTCGGTGGTCTGGGATGGAGGTACAATAACAAAATTGTCGCGTCCATCTGAAAATGAAATCGGATCATGTTTGTAACAGATCTATTACCAGATGGCAATGAAAGCTAAGTATACCAACCCATTCACTCAATTTAATCTATTTGGGTCCTGCTTCTGTTCGGGTACCCGGGCTGTATCGCAATCCACACACAGATCAAGTGACTTGTGTGGCGCGTATGTATTTGGTGCCCCTTTGTACCCATATTTATGTCCAAATAAATAAATCTATTTGGGTATGACCTAACTAACTCTACCAACCAATTTACTTTGACAACCGACAATTAGTATCATTGAACATCACAGGAAAGATAAAACGAAATCTGATACACGAACCACCATTAAGCCG]

[+] EMBL CD121481             [ACTCGTTTCCTTAATCGCGTCCTACTATTCCCTAAGGGCTCGTACTCCTACGTATCAGACAGTGAGTTTAATTAATAAAGGTACCTCATAGAGAAGGAGTATAAATACCTAATCATCCAATTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGAGGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAACTTCATTATCTGACAACATCAAGTCCATTAGAATAATGTTATTAGTCTGAGCACATGTTGAGAGAAAAACGATGTAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD121439             [   CGTTTCCTTAATCGCATCCTACTATTCCCTAGGGCCTCGTACTCCTACGTATCAGACAGTGAGTTTAATTAATAAAGGTACCTCATAGAGAAGGAGTATAAATACCTAATCATCCAATTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGAGGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAACTTCATTATCTGAAAAAATCAAGTCCATTAAAATAATGTTATTAGTCTGAGCACATGTTGAGAGAAAAACGATGTAATATGAAATCACAAATCTCAATACACTGGCATAACTAGAA  TTATGAACTCAAACTATAAAGAAACGTGGGGAATTCGGTGGTCTGGGATGGAGGTACAATAACAAAATTGTCGCGTCCATCTGAAAATGAAATCGGATCATGTTTGTAACAGATCTATTACCAGAT                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD121424             [   CGTTTCCTTAATCGCATCCTACTATTCCCTAGGGCCTCGTACTCCTACGTATCAGACAGTGAGTTTAATTAATAAAGGTACCTCATAGAGAAGGAGTATAAATACCTAATCATCCAATTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGAGGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAACTTCATTATCTGAAAAAATCAAGTCCATTAAAATAATGTTATTAGTCTGAGCACATGTTGAGAGAAAAACGATGTAATATGAAATCACAAATCTCAATACACTGACATAACTAGAA  TTATGAACTCAAACTATAAA                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD095549             [                                                                                               GGAGTATAAATACCTAATCATCCAATTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGAGGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAACTTCATTATCTGAAAAAATCAAGTCCATTAAAATAATGTTATTAGTCTGAGCACATGTTGAGAGAAAAACGATGTAATATGAAATCACAAATCTCAATACACTGACATAACTAGAATTTTATG ACTC AACTATAA                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD121437             [                                                                                                                                                                                                                                                                                                                                                       GACATAACTAGAA  TTATGAACTCTAACTATAAAGAAACGTGGGGAATTCGCTGGTCTGGGATGGAGGTACAATAACAAAATTGTCGCGTCCATCTGAAAATGAAATCGGATCATGTTTGTAACAGATCTATTACCAGATGGCAATGAAAGCTAAGTATACCAACCCATTCACTCAATTTAATCTATTTGGGTCCTGCTTCTGTTCGGGTACCCGGGCTGTATCGCAATCCACACACAGATCAAGTGACTTGTGTGGCGCGTATGTATTTGGTGCCCCTTTGTACCCATATTTATGTCCAAATAAATAAATCTATTTGGGTATGACCTAACTAACTCTACCAACCAATTTACTTTGACAACCGACAATTAGTATCATTGAACATCACAGGAAAGATAAAACGAAATCTGATACACGAACCACCATTAAGCCG]




>consensus_7296#0
ACTCGTTTCCTTAATCGCATCCTACTATTCCCTAGGGCCTCGTACTCCTACGTATCAGAC
AGTGAGTTTAATTAATAAAGGTACCTCATAGAGAAGGAGTATAAATACCTAATCATCCAA
TTTTAAAACTTGCTAGGTTCTAACGAACTACGTATTTATGTACAAAAAGAAACATAACGA
GGTAGAAAATGTAAACTTTTTACATAAGCGAGCAATAATACCTACATTTGCAACTATGAA
CTTCATTATCTGAAAAAATCAAGTCCATTAAAATAATGTTATTAGTCTGAGCACATGTTG
AGAGAAAAACGATGTAATATGAAATCACAAATCTCAATACACTGACATAACTAGAATTAT
GAACTCAAACTATAAAGAAACGTGGGGAATTCGGTGGTCTGGGATGGAGGTACAATAACA
AAATTGTCGCGTCCATCTGAAAATGAAATCGGATCATGTTTGTAACAGATCTATTACCAG
ATGGCAATGAAAGCTAAGTATACCAACCCATTCACTCAATTTAATCTATTTGGGTCCTGC
TTCTGTTCGGGTACCCGGGCTGTATCGCAATCCACACACAGATCAAGTGACTTGTGTGGC
GCGTATGTATTTGGTGCCCCTTTGTACCCATATTTATGTCCAAATAAATAAATCTATTTG
GGTATGACCTAACTAACTCTACCAACCAATTTACTTTGACAACCGACAATTAGTATCATT
GAACATCACAGGAAAGATAAAACGAAATCTGATACACGAACCACCATTAAGCCG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)