These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7304#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 871 fasta sequence [CGTATTTAGGTAGTGACGAACTTGCCTCCCTCATTGCAACTGCTGCTCAAGATTCTGTTGGGGCTGAGCTAAGTGAGGAAGACTGTGAAAACCTTCAAAAATATGCACAACGCTTATTGCAAATGAATGAGGCAAAACAACGGTATGTAAATTCCTTGTCACGACGAATAACTAGTTTGTGTCCTAATTTGCATGCTCTTCTTCACTGTACACTTCATTCAAGTGATGAGGCGGAACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGCTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAANATATTAAGAGATCCGAAATTACCAACAGATACAGACAATCTTCAACCGGCAACTCCCAGTATTTCCGCAGCTGAGTTGAAGTCTTTGAGTGCTAATCGTGTACAGAGGAACACAGTGCATCGTCGTGCTGCGCGTCTACTTGCTGATAAATCAGTTCTCGCTTGTCGTGCAGACTGTTTCCGCCAACACAATCCCATTTACCAACA--GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAA-AACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGTAAAGCTTGGTTCACCCGTAAACTTTC] [+] EMBL CD153045 [CGTATTTAGGTAGTGACGAACTTGCCTCCCTCATTGCAACTGCTGCTCAAGATTCTGTTGGGGCTGAGCTAAGTGAGGAAGACTGTGAAAACCTTCAAAAATATGCACAACGCTTATTGCAAATGAATGAGGCAAAACAACGGTATGTAAATTCCTTGTCACGACGAATAACTAGTTTGTGTCCTAATTTGCATGCTCTTCTTCACTGTACACTTCATTCAAGTGATGAGGCGGAACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGCTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAANATATTAAGAGAT ] [+] EMBL CD194576 [ AACAAGGAAAAGTTCCTAAGGCTAATGACAATTTGTCATCTTGTTTGGTTACCGCACGTCTAATAGCTAATGCTGGTTCTTTCAACCGACTTGCTTCTATGCCTTCTACACGTTTACTGTCTTTAGGAGCATCAAAAGGATTATTCAGGAAAGGTGGTGCTGTTGTGGCTACATCTACAGGTCTTTTATCAAACGCAACTAAAATATTAAGAGATCCGAAATTACCAACAGATACAGACAATCTTCAACCGGCAACTCCCAGTATTTCCGCAGCTGAGTTGAAGTCTTTGAGTGCTAATCGTGTACAGAGGAACACAGTGCATCGTCGT ] [+] EMBL CD152487 [ TTTGAGTGCTAATCGTGTACATAGGAACACAGCGCATCGTCGTGCTGCGCGTCTACTTGCTGATAAATCAGTTCTCGCTTGTCGTGCAGACTGTTTCCGCCAACACAATCCCATTTACCAACA GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGG ] [-] EMBL CD061249 [ GCCAACACAATCCCATTGACCAACAAGGCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAATAACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGTAAAGCTTGGTTCACCCGTAAACTTTC] [-] EMBL CD061267 [ GCCAACACAATCCCATTTACCAACA GCAAGGTCTTGCTTCACAACCTTGTGTTTCTGTTATGGAAGATGAACGACTCAAAAGTGGAGCATATGGTCAGTATCTTGGAAAAACTGTACAAGAACACTTGAGGATATGGGCTGAAAAAAACGGGATACATACAGACAA AACCGAGGAACAGAAGAAGGCTCAGCGTGAAAGAAGGAAAAAGTATCGGAAACTTAAACGAAAAGCTTGGTTCACCCGTAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||