Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7312 cluster # 7312       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7312#0 length = 742 sequences # 5  

consensusID : consensus_7312#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 742
fasta sequence
                              [GACGACGATGAAGATGATGAAGATTTCAAACCACCGGAATCTGATGGTTCTGAACTTGCAGAAGAATATGATAGTAATGTTCAAACAACTACAAGTGAAGATGAATCTGGAGAAAACGATGATGACGATGATTCGGAAGAGGACGAAACGAACATTAGTAGTAAGAATACTACTACACACAAGAAAAAAGATAAACAAGACAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGTAAGTAGTACTAGTGAACCTAAACCAAAACAGAAAAAGTTGAAAGAAGAACCAAAGAAATCAACAATTAAATCACGTAAAGATGAAACAAAACAACCATCAAAACGACAAACAAAAAAACAAAAAAAACCTAAAGATCCTAATGCACCAACTCGTCCACTTTCTGCTTATTTCTTATGGTTTAATGAGAATAGAGAGAGAATTGCTAAAAATTTAGGTGGACAAAATTCTGTTGCCGAAGTAGCTAAAGCTGCTGGAGAGATTTGGCGAAATATGGATAGTACAGCAAAATCAAGTTATCAATCAAGAGTTGATGAATTAAAAAAGAAATATCAAGAAGATTTACGTATATATCAATCAAATTTAGGATCTAATAAAGAACCAGATTTATCATCAGATTCTAGTAGTTAAGTCTAGAAATGATTAACACTTGTTAAATAAGATATCAAACTGA-TATTGNTTTAATATACTATGTGCACTATATATATATACCATTTCCATTTAT]

[-] EMBL AI976563             [GACGACGATGAAGATGATGAAGATTTCAAACCACCGGAATCTGATGGTTCTGAACTTGCAGAAGAATATGATAGTAATGTTCAAACAACTACAAGTGAAGATGAATCTGGAGAAANCGATGATGACGATGATTCGGAAGAGGACGAAACGAACATTAGTAGTAAGAATACTACTACACACAAGAAAAAAGATAAACAAGACAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGTAAGTAGTACTAGTGAACCTAAACCAAAACAGAAAAAGTTGAAAGAAGAACCAAAGAAATCAACAATTAAATCACGTAAAGATGAAACAAAACAACCATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD193357             [                                 CCGGAATCTGATGGTTCTGAACTTGCAGAAGAATATGATAGTAATGTTCAAACAACTACAAGTGAAGATGAATCTGGAGAAAACGATGATGACGATGATTCGGAAGAGGACGAAACGAACATTAGTAGTAAGAATACTACTACACACAAGAAAAAAGATAAACAAGACAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD080299             [                                                                                              GTGAAGATGAATCTGGAGAAAACGATGATGACGATGATTCGGAAGAGGACGAAACGAACATTAGTAGTAAGAATACTACTACACACAAGAAAAAAGATAAACAAGACAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGTAAGTAGTACTAGTGAACCTAAACCAAAACAGAAAAAGTTGAAAGAAGAACCAAAGAAATCAACAATTAAATCACGTAAAGATGAAACAAAACAACCATCAAAACGACAAACAAAAAAACAAAAAAAACCTAAAGATCCTAATGCACCAACTCGTCCACTTTCTGCTTATTTCTTATGGTTTAATGAGAATAGAGAGAGAATTGCTAAAAATTTAGGTGGACAAAATTCTGTTGCCGAAGTAGCTAAAGCTGCTGGAGAGATTTGGCGAAATATGGATAGTACAGCAAAATCAAGTTATCAATCAAGAGTTGATGAATTAAAAAAGAAATATCAAGAAGATTTACGTATATATCAATCAAATTTAGGATCTAATAAAGAACCAGATTTATCATCAGATTCTAGTAGTTAAGTCTAGAAATGATTAACACTTGTTAAATAAGATATCAAACTGA TATTGNTTTAATATACTATGTGCACTATATATA                  ]
[-] EMBL CD074217             [                                                                                                                                                                                      GAAAAAAGATAAACAAGCCAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGTAAGTAGTACTAGTGAACCTAAACCAAAACAGAAAAAGTTGAAAGAAGAACCAAAGAAATCAACAATTAAATCACGTAAAGATGAAACAAAACAACCATCAAAACGGCAAACAAAAAAACAAAAAAAACCTAAAGATCCTAATGCACCAACTCGTCCACTTTCTGCTTATTTCTTATGGTTTAATGAGAATAGAGAGAGAATTGCTAAAAATTTAGGTGGACAAAATTCTGTTGCCGAAGTAGCTAAAGCTGCTGGAGAGATTTGGCGAAATATGGATAGTACAGCAAAATCAAGTTATCAATCAAGAGTTGATGAATTAAAAAAGAAATATCAAGAAGATTTACGTATATATCAATCAAATTTAGGATTTAATAAAGAACCAGATTTATCATCAGATTTTAGTAGTTAAGTCTAGAAATGATTAACACTTGTTAAATAAGATATC AACTGATTATTGTTTTAATATACTATGTGCCCTATATATATATACCATTTCCATTTAT]
[-] EMBL AI974986             [                                                                                                                                                                                                       gCAATGATAGTTATTAAGATGAAGACAGCTTGTCAAGTGTAAGTAGTACTAGTGAACCTAAACCAAATCAGAAAAAGTTGAAAGAAGAACCAAAGAAATCAACAATTAAATCTCGTAAAGATGAAACAAAACAACCATCAAA                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_7312#0 GACGACGATGAAGATGATGAAGATTTCAAACCACCGGAATCTGATGGTTCTGAACTTGCA GAAGAATATGATAGTAATGTTCAAACAACTACAAGTGAAGATGAATCTGGAGAAAACGAT GATGACGATGATTCGGAAGAGGACGAAACGAACATTAGTAGTAAGAATACTACTACACAC AAGAAAAAAGATAAACAAGACAATGATAGTGATGAAGATGAAGACAGCTTGTCAAGTGTA AGTAGTACTAGTGAACCTAAACCAAAACAGAAAAAGTTGAAAGAAGAACCAAAGAAATCA ACAATTAAATCACGTAAAGATGAAACAAAACAACCATCAAAACGACAAACAAAAAAACAA AAAAAACCTAAAGATCCTAATGCACCAACTCGTCCACTTTCTGCTTATTTCTTATGGTTT AATGAGAATAGAGAGAGAATTGCTAAAAATTTAGGTGGACAAAATTCTGTTGCCGAAGTA GCTAAAGCTGCTGGAGAGATTTGGCGAAATATGGATAGTACAGCAAAATCAAGTTATCAA TCAAGAGTTGATGAATTAAAAAAGAAATATCAAGAAGATTTACGTATATATCAATCAAAT TTAGGATCTAATAAAGAACCAGATTTATCATCAGATTCTAGTAGTTAAGTCTAGAAATGA TTAACACTTGTTAAATAAGATATCAAACTGATATTGNTTTAATATACTATGTGCACTATA TATATATACCATTTCCATTTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)