Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7317 cluster # 7317       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7317#0 length = 694 sequences # 5  
consensusID : consensus_7317#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 694
fasta sequence 
                              [GCACTAAATCGTTAGATACATAACAGTGCACATATTTTTTTCTTCAACAAGACACACCTTTAATGATGATTAGTTATCTAAAAACAGATTTAAGTCATGTTATTCTCCATGTTGAAAATTCAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAATAAAATGGACTTCGCAAAAAAAAA--AAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAGAAAAATGGTTCTTCTAGTTTCAATATTTAAATAAACATAATCACTAAACGTAACACATTCAAAGAAATGCTCATTGGGAGATTAATTATTTATCAGGAGAAACATCATGGATAAATAAAAGTCAGCGAAATCGTCTCTTTTCTACTTCAGAAGAAGT]

[+] EMBL CD118616             [GCACTAAATCGTTAGATACATAACAGTGCACATATTTTTTTCTTCAACAAGACACACCTTTAATGATGATTAGTTATCTAAAAACAGATTTAAGTCATGTTATTCTCCATGTTGAAAATTCAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAATAAAATGGACTTCGCAAAAAAAAA  AAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAAC AAACCTTAAAGCCTTCAGAAAAA                                                                                                                                                        ]
[+] EMBL CD118620             [GCACTAAATCGTTAGATACATAACAGTGCACATATTTTTTTCTTCAACAAGACACACCTTTAATGATGATTAGTTATCTAAAAACAGATTTAAGTCATGTTATTCTCCATGTTGAAAATTCAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAATAAAATGGACTTCGC AAAAAAAA  AAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAG                                                                                                                                                             ]
[-] EMBL CD118685             [ CACTAAATCGTTAGATACATAACAGTGCACATATTTTTTTCTTCAACAAGACACACCTTTAATGATGATTAGTTATCTAAAAACAGATTTAAGTCATGTTATTCTCCATGTTGAAAATTCAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAATAAAATGGACTTCGC AAAAAAAA  AAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAGA                                                                                                                                                            ]
[+] EMBL CD076543             [                                                                                                    TATTCTCCATGTTGAAAATTCAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAATAAAATGGACTTCGCAAAAAAAAATGAAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAGAAAAATGGTTCTTCTAGTTTCAATATTTAAATAAACATAATCACTAAACGTAACACATTCAAAGAAATGCTCATTGGGAGATTAATTATTTATCAGGAGAAACATCATGGATAAATAAAAGTCAGCGAAATCGTCTCTTTTCTACTTCAGAAGAAGT]
[+] EMBL CD196511             [                                                                                                                                                                           ATAAATAAATAAAATGGACTTCGCAAAAAAAAATGAAAAGAAAATCAAATTATATTGCAACCAAATCAATATTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATCCGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAAACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAACAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAGAAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAGAAAAATGGTTCTTCTAGTTTCAATATTTAA                                                                                                                               ]




>consensus_7317#0
GCACTAAATCGTTAGATACATAACAGTGCACATATTTTTTTCTTCAACAAGACACACCTT
TAATGATGATTAGTTATCTAAAAACAGATTTAAGTCATGTTATTCTCCATGTTGAAAATT
CAAACTCAAAAAATTGTAGGCTGACATTTAAGAATCAAAGAGAAGCAAATTATAAATAAA
TAAAATGGACTTCGCAAAAAAAAAAAAAGAAAATCAAATTATATTGCAACCAAATCAATA
TTATTTTGTCGGCTAAAAGTATACTACTTATATCATGATTAAGTAGTCCAAAATTGTATC
CGAAAAAAGAAAGAAATTAAGCATTCCCAAGTGCGGAAAAAGAACGTAGGAATGTGTTAA
ACTTGCCTGTCAACATTTAAATAAGCTAAAAAACTGACAATGATAAACTGTCACTACTAA
CAACAACATCAACAACAGTATCATGGAAAAACGCTGACAAATATCAGAATAAATGAGAAG
AAACAAGGCAAAAATAACCAAAGAAATCAAATTAAAACAAAACATAAAAGCATCAAGAAA
AATGGTTCTTCTAGTTTCAATATTTAAATAAACATAATCACTAAACGTAACACATTCAAA
GAAATGCTCATTGGGAGATTAATTATTTATCAGGAGAAACATCATGGATAAATAAAAGTC
AGCGAAATCGTCTCTTTTCTACTTCAGAAGAAGT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)