cluster # 7318

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Schistosoma mansoni
cluster # 7318 cluster # 7318 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7318#0 length = 575 sequences # 5

consensusID : consensus_7318#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 575
fasta sequence

                              [TATAAAACAAAATTTGTACAAAACACTTTTTAAATAAATTAAGGGTTCCAAAGTTTTAATAAACCATCTTCTGCATATGTTGCTAATAAATTCTGATGTGGATGATGTGCACAACCAATGATACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAACAA-TACAATGATTGATCTTCA-GCTACGCA-ATAAATCCATTCAC-CTCGTCCAC-TAAGTGTACAATCAACAATATCTCCATTTTCACGTTTACCATTAGTGAAACTTTGCACAACTTGACCTTGAGCATTCATTATAGCAACAGTATTTGAACGACTACCAACAAGAAAATGATCTGGATCTTGTGGAAACAAGATAATGGAATGAATAGGTACTTCACGTCCAAGTAAACTAGAAACAGTCTTAAAACTATTTATACATTCACCGCTACGATATGACCAAATTTTTACAGATCCATCAGAACTTCCACTAAGAAAATGATCACCATCTGGTAAGAATACCAGACAATTTATAACTCCAGTATGGCCAATAAATTCACGTAGCATTTTGCCTGATTT]

[+] EMBL BF936179             [TATAAAACAAAATTTGTACAAAACACTTTTTAAATAAATTAAGGGTTCCAAAGTTTTAATAAACCATCTTCTGCATATGTTGCTAATAAATTCTGATGTGGATGATGTGCACAACCAATGATACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAACAA TACAATGATTGATCTTCA GCTACGCA ATAAATCCATTCAC CTCGTCCAC TAAGTGTACAATCAACAATATCTCCATTTTCACGTTTACCATTAGTGAAACTTTGCACAACTTGACCTTGAGCATTCATTATAGCAACAGTATTTGAACGACTACCAACAAGAAAATGATCTGGATCTTGTGGAAACAAGATAATGGAATGAATAGGTACTTCACGTCCAAGTAAACTAGAAACAGTCTTAAAACTATTTATACATTCACCGCTACGATATGACCAAATTTTTACAGATCCATCAGAACTTCCACTAAGAAAATGATCACCATCTGGTAAGAATACCAGACAATTTATAACTCCAGTATGGCCAATAAATTCACGTAGCATTTTGCCTGATTT]
[-] EMBL CD061295             [                                                                                                                  CCAATGATACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAACAA TACAATGATTGATCTTCA GCTACGCA ATAAATCCATTCAC CTCGTCCAC TAAGTGTACAATCAACAATATCTCCATTTTCACGTTTACCAT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD061497             [                                                                                                                        ATACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCTCCAGATCTAACCCTGAAACAA TACAATGATTGATCTTCA GCTACGCA ATAAATCCATTCAC CTCGTCCAC TAAGTGTACAATCAACAATATCTCCATTTTCACGTTTACCATT                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD061309             [                                                                                                                         TACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAACAA TACAATGATTGATCTTCA GCTACGCANATAAATCCATTCACTCTCGTCCACGTAAGTGTACAATCA                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD061283             [                                                                                                                        accgTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAACAAGTACAATGATTGATCTTCAGGCTACGCA ATAAATCCATTCAC CTCGTCCAC TAGGTGTACTATCAAGAATATCTCCATTTTCACGTTTACCATT                                                                                                                                                                                                                                                                                                            ]




>consensus_7318#0
TATAAAACAAAATTTGTACAAAACACTTTTTAAATAAATTAAGGGTTCCAAAGTTTTAAT
AAACCATCTTCTGCATATGTTGCTAATAAATTCTGATGTGGATGATGTGCACAACCAATG
ATACTTTTATCATGAACATGTAAAGTATGCTCTAGTTTTCCACCAGATCTAACACTGAAA
CAATACAATGATTGATCTTCAGCTACGCAATAAATCCATTCACCTCGTCCACTAAGTGTA
CAATCAACAATATCTCCATTTTCACGTTTACCATTAGTGAAACTTTGCACAACTTGACCT
TGAGCATTCATTATAGCAACAGTATTTGAACGACTACCAACAAGAAAATGATCTGGATCT
TGTGGAAACAAGATAATGGAATGAATAGGTACTTCACGTCCAAGTAAACTAGAAACAGTC
TTAAAACTATTTATACATTCACCGCTACGATATGACCAAATTTTTACAGATCCATCAGAA
CTTCCACTAAGAAAATGATCACCATCTGGTAAGAATACCAGACAATTTATAACTCCAGTA
TGGCCAATAAATTCACGTAGCATTTTGCCTGATTT

clustalw multiple alignements is not computed in this case