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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7338 cluster # 7338       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7338#0 length = 628 sequences # 5  

consensusID : consensus_7338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 628
fasta sequence
                              [CGCTTTGCTTAATGGTTTTATTTTACGTAAGG-ACTCATGAAATTTATTTTTTTAACAAATAGTGAAGTTTCTTTTTCAAACTAATCTACAATATGACACGATTTTCACAAAACTTACATTCACACTATATAAACTGAAAACAGAGATATATACAAGCAGGTTACAAAAAAGTGCTTAATCACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTAAAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAATACAGTTCAGAAGTAACCATTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGATTACAC-TTGGATTCTTCATATGAGTTCTAGAAACAGAATTTATTTACCAAACAGTATACTAGATACTTAGTTACAGATGTTTCTTTTTT]

[+] EMBL CD122374             [CGCTTTGCTTAATGGTTTTATTTTACGTAAGG ACTCATGAAATTTATTTTTTTAACAAATAGTGAAGTCTCTTTTTCGAACTAATCTACAATATGACACGATTTTCACAAAACTTACATTCACACTATATAAACTGAAAACAGAGATATATACAAGCAGGTTACAAAAAAGTGCTTAATCACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAGACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTAAGAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAATACAGTTCAGAAGTAACCATTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGATTACACTTTGGATTCTTCATATGAGTTCTAGAAGCAGAANTTATTTACCAAACAGTATACTAGATACTTAGTTACAGATGTNTCTTTTTT]
[+] EMBL CD122267             [CGCTTTGCTTAATGGTTTTATTTTACGTAAGGCACTCATGAAATTTATTTTTTTAACAAATAGTGAAGTTTCTTTTTCAAACTAATCTACAATATGACACGATTTTCACAAAACTTACATTCACACTATATAAACTGAAAACAGAGATATATACAAGCAGGTTACAAAAAAGTGCTTAATCACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTAAAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAATACAGTTCAGAAGTAACCATTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGATTACAC TTGGATTCTTCATATGAGTTCTAGAAACAGAATTTATTTACC AACAGTATACTAGATACTTAGTTACAGATGTTTCTT    ]
[+] EMBL CD122367             [CGCTTTGCTTAATGGTTTTATTTTACGTAAGG ACTCATGAAATTTATTTTTTTAACAAATAGTGAAGTTGCTTTTTCAAACTAATCTACAATATGACACGATTTTCACAAAACTTACATTCACACTATATAAACTGAAAACAGAGATATATACAAGCAGGTTACAAAAAAGTGCTTAATCACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAGTTTCCAAACGAATGTTTATATTAAGTAAAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCC AACAAC                                                                                                                                                                             ]
[-] EMBL CD122410             [                                                                                                                                                                     AAAAAAGTGCTTAATCACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTAAAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAATACAGTTCAGAAGTAACCACTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGATTACAC TTGGATTCTTCATATGAGTTCTAGAAACAGAATTTATTTACCAAACAGTATACTAGATACTTAGTTACAGATGTTTCTTTT  ]
[-] EMBL CD122315             [                                                                                                                                                                                      CATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATCATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAATCTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTAAAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATCCTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAATACAGTTCAGAAGTAACCATTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGATTACAC TTGGATTCTTCATATGAGTTCTAGAAACAGAATTTATTTACCAAACAGTATACTAGATACTTAGTTACAGATGTTTCTTTTTT]


>consensus_7338#0 CGCTTTGCTTAATGGTTTTATTTTACGTAAGGACTCATGAAATTTATTTTTTTAACAAAT AGTGAAGTTTCTTTTTCAAACTAATCTACAATATGACACGATTTTCACAAAACTTACATT CACACTATATAAACTGAAAACAGAGATATATACAAGCAGGTTACAAAAAAGTGCTTAATC ACATGTGTGAGCTATGAACCGAGTTAGGAAGCGAAATAGAAACTATATTTCTAGAAAATC ATATGTACCGTAAAGATTGCAAATGAGTGAATACATTTACGCAAACACAATTGGATGAAT CTAAGTGTAGATTCTCCAACATTTAATGAAGAATTTCCAAACGAATGTTTATATTAAGTA AAAAGACTTTAGATGATTTAACAGTTATACATAGGTTATATATACATTAAAGGTCACATC CTTACAGTTTTTTACATCTCCATTTACCCAAACAACATACAGATAAGTATCGACTGGAAT ACAGTTCAGAAGTAACCATTCTGTTTATTATGATGACAGAGTGAATTCAAGTGAATGGAT TACACTTGGATTCTTCATATGAGTTCTAGAAACAGAATTTATTTACCAAACAGTATACTA GATACTTAGTTACAGATGTTTCTTTTTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)