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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7343 cluster # 7343       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7343#0 length = 928 sequences # 5  

consensusID : consensus_7343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 928
fasta sequence
                              [ACTGTTTCTTTTTTGGTTTTTATCTTACACATTATTAAAGAGCCAATTAAAGGAAAATACAATTTCCAAACGACAAGAAGATTGAATATATTGTTGATTGCTAACTAATTAAAGAACCGGATTTCTAGAAAAAAAATCAATATAAATTAAAAGTATGGAGGTAAGAAGGGATTCTAGAAAATAATAGAACATTTAGTCAGTAGAGACATTTGCATAAGCTCGAAATGCTAATAAATCTGAATCATTTTTCTGTAATTGATGAACAATGAAAGCAGTTCCAGCATTGATGAAAAACACAGATCCTTGATCGTATTCAAAAGATTCACAGACAAACGCGGGAGGCATTGGATAATTATCTACATATTTTGATCTGTCA-TTGTCTAGCTTTGTGTTAGAAGTGGATAAAGTATCCCAGTGT-AAACGCTGTAACGTGCCTTTTCCACGGATAATGATCAAAACGGTAGCAGATTTCAATGGTGAAAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCAAAATCATCAACTGGAGGAGAAAATGTCACGATTTCAGACATAACTGATGTATCATCTTCAATTGGTTTC-TTTCTTGATCATCACTAGTATGCATATCTGAATTGATTGGTACAATTTTTTTCGTCTGACCAACAAACTTCAATGCTGATCCCCATCGAGGTTCATATTGAATAATTCGAAGCAGATGATCCACATCTTTGAATTTCGGTGTTAAACCGGCACGAATTACATTATCCGAAGAAGCCATACATTCCACGCAATCACCGGATAAATAAGCATGTGGTAAATTAGGTTCAAGAAAAATTGCTTCTCCTGGACTGAGTTTTAAATAATTAAAAAAGAACAAACTAAAACAGCCAACATCTCCAGGGTAATCTGTTGCTAAACGAATGAATACCT]

[+] EMBL CD076555             [ACTGTTTCTTTTTTGGTTTTTATCTTACACATTATTAAAGAGCCAATTAAAGGAAAATACAATTTCCAAACGACAAGAAGATTGAATATATTGTTGATTGCTAACTAATTAAAGAACCGGATTTCTAGAAAAAAAATCAATATAAATTAAAAGTATGGAGGTAAGAAGGGATTCTAGAAAATAATAGAACATTTAGTCAGTAGAGACATTTGCATAAGCTCGAAATGCTAATAAATCTGAATCATTTTTCTGTAATTGATGAACAATGAAAGCAGTTCCAGCATTGATGAAAAACACAGATCCTTGATCGTATTCAAAAGATTCACAGACAAACGCGGGAGGCATTGGATAATTATCTACATATTTTGATCTGTCA TTGTCTAGCTTTGTGTTAGAAGTGGATAAAGTATCCCAGTGT AAACGCTGTAACGTGCCTTTTCCACGGATAATGATCAAAACGGTAGCAGATTTCAATGGTGAAAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCANAATCATCAACTGGAGGAGAAAATGTCACGATTTCAGACATAACTGATGTAT                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD138134             [                                                                                                                                                                  AAGAAGGGATTCTAGAAAATAATAGAACATTTAGTCAGTAGAGACATTTGCATAAGCTCGAAATGCTAATAAATCTGAATCATTTTTCTGTAATTGATGAACAATGAAAGCAGTTCCAGCATTGATGAAAAACACAGATCCTTGATCGTATTCAAAAGATTCACAGACAAACGCGGGAGGCATTGGATAATTATCTACATATTTTGATCTGTCA TTGTCTAGCTTTGTGTTAGAAGTGGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD082971             [                                                                                                                                                                                                                                                                                                                                                                             nTGATCTGTCA TTGTCTAGCTNTGTGTTAGAAGTGGATANAGTATCNCAGTGT AAACGCTGTAACGTGCCTTTTCCACGGATAATGATCAAAACGGTAGCAGATTTCAATGGTGAAAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCAAAATCATCAACTGGAGGAGAAAATGTCACGATTTCAGACATAACTGATGTATCATCTTCAATTGGTTTCTTTTCTTGATCATCACTAGTATGCATATCTGAATTGATTGGTACAATTTTTTTCGTCTGACCAACAAACTTCAATGCTGATCCCCATCGAGGTTCATATTGAATAATTCGAAGCAGATGATCCACATCTTTGAATTTCGGTGTTAAACCGGCACGAATTACATTATCCGAAGAAGCCATACATTCCACGCAATCACCGGATAAATAAGCATGTGGTAAATTAGGTTCAAGAAAAATTGCTTCTCCTGGACTGAGTTTTAAATAATTAAAAAAGAACAAACTAAAACAGCCAACATCTCCAGGGTAATCTGTTGCTAAACGAATGAATACCT]
[-] EMBL SMAA69250            [                                                                                                                                                                                                                                                                                                                                                                                   TGTCATTTGTCTAGCTTTGTGTTAGAAGTGGAT AAGTATCCCAGTGTAAAACGCTGTAACGTGCCTTTTCCACGGATAATGATCAAAACGCTAGCAGATTTCAATGGTGAAAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCAAAATCATCAACTGGAGGAGAAAATGTC                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL SMAA28931            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ggtTAGCAGATTTCAATGGTGAAAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCAAAATCATCAACTGGAGGAGAAAATGTCACGATTTCAGACATAACTGATGTATCATCTTCAATTGGTTTC TTTCTTGATCATCACTAGTATGCATATCTGAATTGATTGGTACAATTTTTTTCGTCTGACCAACAAACTTCAATGCTGATCCCCATCGAGGTTCATATTG                                                                                                                                                                                                                                      ]


>consensus_7343#0 ACTGTTTCTTTTTTGGTTTTTATCTTACACATTATTAAAGAGCCAATTAAAGGAAAATAC AATTTCCAAACGACAAGAAGATTGAATATATTGTTGATTGCTAACTAATTAAAGAACCGG ATTTCTAGAAAAAAAATCAATATAAATTAAAAGTATGGAGGTAAGAAGGGATTCTAGAAA ATAATAGAACATTTAGTCAGTAGAGACATTTGCATAAGCTCGAAATGCTAATAAATCTGA ATCATTTTTCTGTAATTGATGAACAATGAAAGCAGTTCCAGCATTGATGAAAAACACAGA TCCTTGATCGTATTCAAAAGATTCACAGACAAACGCGGGAGGCATTGGATAATTATCTAC ATATTTTGATCTGTCATTGTCTAGCTTTGTGTTAGAAGTGGATAAAGTATCCCAGTGTAA ACGCTGTAACGTGCCTTTTCCACGGATAATGATCAAAACGGTAGCAGATTTCAATGGTGA AAACTGAACTATTTTATCCTTGTCCGATATTGAGATTTTATCCACAGCAAAATCATCAAC TGGAGGAGAAAATGTCACGATTTCAGACATAACTGATGTATCATCTTCAATTGGTTTCTT TCTTGATCATCACTAGTATGCATATCTGAATTGATTGGTACAATTTTTTTCGTCTGACCA ACAAACTTCAATGCTGATCCCCATCGAGGTTCATATTGAATAATTCGAAGCAGATGATCC ACATCTTTGAATTTCGGTGTTAAACCGGCACGAATTACATTATCCGAAGAAGCCATACAT TCCACGCAATCACCGGATAAATAAGCATGTGGTAAATTAGGTTCAAGAAAAATTGCTTCT CCTGGACTGAGTTTTAAATAATTAAAAAAGAACAAACTAAAACAGCCAACATCTCCAGGG TAATCTGTTGCTAAACGAATGAATACCT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)