These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_745#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 406 fasta sequence [TTTTTTTTTTTTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATCTACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAGTAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTATAATTAATTATGAAGTTAAGGGATATTATAACCGAACGTATTAATGAGCATCCGTAAGTGCAACAACTCCGGGTAATTGTTTACCTTCGAGAAGTTCAAGACTAGCACCACCACCAGTACTGACATGACTAACTTTGTCTTCTGTGTCCCATTTGGCGCACATGTTGCGGTGTCACCACCAACAATATAGTTGTAGCACATTTTTAGTACTTGGACTACTCAT] [+] EMBL AI395264 [TTTTTTTTTTTTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATCTACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAGTAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTATAATTAATTATGAAGTTAAGGGATATTATAACCGAACGTATTAATGAGCATCCGTAAGTGCAACAACTCCGGGTAATTGTTTACCTTCGAGAAGTTCAAGACTAGCACCACCACCAGTACTGACATGACTAACTTTGTCTTCTGTGTCCCATTTGGCGCACATGTTGCGGTGTCACCACCAACAATATAGTTGTAGCACATTTTTAGTACTTGGACTACTCAT] consensusID : consensus_745#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 398 fasta sequence [TTTTTTTTTTTTTTTTTATATGACAAAAGTTTTATTCTTGGATGATGTTACAATGAAATACCAACAGCACCTTTTCAATATACCACTTGAAGATGGGCAAAAGCTACGCACATATATGGAAAAAAAACTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATCTACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAGTAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTATAATTAATTATGAAGTTAAGGGATATTTAAACCGAACGTATTAATGAGCATCCGTAAGTGCAACAACTCCCGGGAAATGTTAACCTTCGAGAAATTCA] [+] EMBL AI394924 [TTTTTTTTTTTTTTTTTATATGACAAAAGTTTTATTCTTGGATGATGTTACAATGAAATACCAACAGCACCTTTTCAATATACCACTTGAAGATGGGCAAAAGCTACGCACATATATGGAAAAAAAACTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATCTACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAGTAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTATAATTAATTATGAAGTTAAGGGATATTTAAACCGAACGTATTAATGAGCATCCGTAAGTGCAACAACTCCCGGGAAATGTTAACCTTCGAGAAATTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_745#0 ------------------------------------------------------------ consensus_745#1 TTTTTTTTTTTTTTTTTATATGACAAAAGTTTTATTCTTGGATGATGTTACAATGAAATA 60 consensus_745#0 ---------------------------------------------------------TTT 3 consensus_745#1 CCAACAGCACCTTTTCAATATACCACTTGAAGATGGGCAAAAGCTACGCACATATATGGA 120 consensus_745#0 TTTTTTTTTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATC 63 consensus_745#1 AAAAAAACTATTACAGGAAATTTCTATTGGCAGCAAATGCGCATATGGCAGAAATACATC 180 **************************************************** consensus_745#0 TACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAG 123 consensus_745#1 TACACGTACAGAAATTAAAGAGAAAATATATCCGTCAAATCAAGAACAGATATATAACAG 240 ************************************************************ consensus_745#0 TAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTA 183 consensus_745#1 TAAAAAGTAACCATAAAACTGGGAACAATTGTGACAATTCAAAGTTAAGAACACTAATTA 300 ************************************************************ consensus_745#0 TAATTAATTATGAAGTTAAGGGATATTATAACCGAACGTATTAATGAGCATCCGTAAGTG 243 consensus_745#1 TAATTAATTATGAAGTTAAGGGATATTTAAACCGAACGTATTAATGAGCATCCGTAAGTG 360 *************************** ******************************* consensus_745#0 CAACAACTCCGGGTAATTGTTTACCTTCGAGAAGTTCAAGACTAGCACCACCACCAGTAC 303 consensus_745#1 CAACAACTCCCGGGAAATGTTAACCTTCGAGAAATTCA---------------------- 398 ********** ** ** **** *********** **** consensus_745#0 TGACATGACTAACTTTGTCTTCTGTGTCCCATTTGGCGCACATGTTGCGGTGTCACCACC 363 consensus_745#1 ------------------------------------------------------------ consensus_745#0 AACAATATAGTTGTAGCACATTTTTAGTACTTGGACTACTCAT 406 consensus_745#1 ------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||