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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7460 cluster # 7460       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7460#0 length = 994 sequences # 5  

consensusID : consensus_7460#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 994
fasta sequence
                              [ATGGATTTAAAAAAAAGGAACAAAGAAAAGAAGTAGGAAGAAGAAGGGAAAAGAGGTTCATTATTATTATTACTATTGTCCTAATAAAGACGAGGTCGATCAAACACAATGCTGGCAAACGACTGACAAGTCTGTGTGTCTGGTTGACCTGGTCCGATCACTGCTGCACCACGTTTGACAATATCGGCAAGTTCTGTAATACGTTCAACAGCTATATGTGCTGTATTAGCTAATCGTGCTTGATCCTCACCAGTTCCACTGACCAAAGATTGAGTATCATCGACAAGAGCACGTGCAGTACGAGCTATACTCTCTCTTAAAGGAGTGAAATTCTCTACATTATGCATTTCTGATCGACTTCCAGCACGACTTGGTATACTAGTTCCATCTGTATTGTTCGATAATGCCAAAGAATGACCTCGATCAGCTGTTAATCGTGAATGACCAAATTCATTATCAGTCCATATTGCATCAAAATCATCACGAACAGGTGGATGTAGCGTGCCTGAACTAGCAAACAGGATAGTTGTATCTAAATCCGAAATAATTCCACTAACTGTGCTAGCAGATTGTAAACAAGCTTGTGTACCAGGACCATGAATTTCGAGCAAGTTGATCAAGTTACGCAATTTTGAATCTAAGAATTCAGCTCGTCTGTCCAGTTCAACTATACTTTTATTACGAGTTAAAAGTAGATGTTGACCACCTGTTGTTGTTCCCGATCCATATATATC-GGGACGACTTGCACTTGTAGCTTGTATTAAACTTATACACGCTGTTCCAACACCACGAACAGCTGATCTCAATTGATCCGCTTGATTGACATCGGGTAAAGTTGCAGCAGCACCTTTACAAGTTTGACACATTTCTTGGTATTCCTGTGTTAAATTATGCGCCAATGGAGCAATCTCACCATCCGAAGCAGGTTGTCTAGCACGTAATTGAATAGCTTGATTCAACTGATCCATATGTCGAGCGATTCTTACATACGTGT]

[+] EMBL CD178472             [ATGGATTTAAAAAAAAGGAACAAAGAAAAGAAGTAGGAAGAAGAAGGGAAAAGAGGTTCATTATTATTATTACTATTGTCCTAATAAAGACGAGGTCGATCAAACACAATGCTGGCAAACGACTGACAAGTCTGTGTGTCTGGTTGACCTGGTCCGATCACTGCTGCACCACGTTTGACAATATCGGCAAGTTCTGTAATACGTTCAACAGCTATATGTGCTGTATTAGCTAATCGTGCTTGATCCTCACCAGTTCCACTGACCAAAGATTGAGTATCATCGACAAGAGCACGTGCAGTACGAGCTATACTCTCTCTTAAAGGAGTGAAATTCTCTACATTATGCATTTCTGATCGACTTCCAGCACGACTTGGTATACTAGTTCCATCTGTATTGTTCGATAATGCCAAAGAATGACCTCGATCAGCTGTTAATCGTGAATGACCAAATTCATTATCAGTCCATATTGCATCAAAATCATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD130009             [                                                                                                                                                                  GCTGCACCACGTTTGACAACATCGGCAAGTTCTGTAATACGTTCAACAGCTATATGTGCTGTATTAGCTAATCGTGCTTGATCCTCACCAGTTCCACTGACCAAAGATTGAGTATCATCGACAAGAGCACGTGCAGTACGAGCTATACTCTCTCTTAAAGGAGTGAAATTCTCTACATTATGCATTTCTGATCGACTTCCAGCACGACTTGGTATACTAGTTCCATCTGTATTGTTCGATAATGCCAAAGAATGACCTCGATCAGCTGTTAATCGTGAATGACCAAATTCATTATCAGTCCATATTGCATCAAAATCATCACGAACAGGTGGATGTAGCGTGCCTGAACTAGCAAACAGGATAGTTGTATCTAAATCCGAAATAATTCCACTAACTGTGCTAGCAGATTGTAAACAAGCTTGg                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD156245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAATGACCAAATTCATANTCAGTCCATATTGCATCAAAATCATCACGAACAGGTGGATGTAGCGTGCCTGAACTAGCAAACAGGATAGTTGTATCTAAATCCGAAATAATTCCACTAACTGTGCTAGCAGATTGTAAACAAGCTTGTGTACCAGGACCATGAATTTCGAGCAAGTTGATCAAGTTACGCAATTTTGAATCTAAGAATTCAGCTCGTCTGTCCAGTTCAACTATACTTTTATTACGAGTTAAAAGTAGATGTTGNCCCNCCCCCGTGGTTGCCGAACCATATATATCGGGGACGACTTGCCCTTGTAGGTTGTATTAAACTTATACACGCTGTTCCAACACCACGAACAGCTGATCTCAATTGATCCGCTTG                                                                                                                                                                                ]
[+] EMBL CD062156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATCAAAATCATCACGAACAGGTGGATGTAGCGTGCCTGAACTAGCAAACAGGATAGTTGTATCTAAATCCGAAATAATTCCACTAACTGTGCTAGCAGATTGTAAACAAGCTTGTGTACCAGGACCATGAATTTCGAGCAAGTTGATCAAGTTACGCAATTTTGAATCTAAGAATTCAGCTCGTCTGTCCAGTTCAACTATACTTTTATTACGAGTTAAAAGTAGATGTTGACCACCTGTTGTTGTTCCCGATCCATATATATC GGGACGACTTGCACTTGTAGCTTGTATTAAACTTATACACGCTGTTCCAACACCACGAACAGCTGATCTCAATTGATCCGCTTGATTGACATCGGGTAAAGTTGCAGCAGCACCTTTACAAGTTTGACACATTTCTTGGTATTCCTGTGTTAAATTATGCGCCAATGGAGCAATCTCACCATCCGAAGCAGGTTGTCTAGCACGTAATTGAATAGCTTGATTCAACTGATCCATATGTCGAGCGATTCTTACATACGTGT]
[-] EMBL CD181817             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTCTGTCCAGTTCAACTATACTTNTATTACGAGTTAAAAGTAGATGTTGACCACCTGTTGTTGTTCNCGATCCATATATATC GGGACGACTTGCACTTGTAGCTTGTATTAAACTTATACACGCTGTTCCAACACCACGAACAGCTGATCTCAATTGATCCGCTTGATTGACATCGGGTAAAGTTGCAGCAGCACCTTTACAAGTTTGACACATTTCTTGGTATTCCTGTGTTAAATTATGCGCCAATGGAGCAATCTCACCATCCGAAGCAGGTTGTCTAGCAC                                                         ]


>consensus_7460#0 ATGGATTTAAAAAAAAGGAACAAAGAAAAGAAGTAGGAAGAAGAAGGGAAAAGAGGTTCA TTATTATTATTACTATTGTCCTAATAAAGACGAGGTCGATCAAACACAATGCTGGCAAAC GACTGACAAGTCTGTGTGTCTGGTTGACCTGGTCCGATCACTGCTGCACCACGTTTGACA ATATCGGCAAGTTCTGTAATACGTTCAACAGCTATATGTGCTGTATTAGCTAATCGTGCT TGATCCTCACCAGTTCCACTGACCAAAGATTGAGTATCATCGACAAGAGCACGTGCAGTA CGAGCTATACTCTCTCTTAAAGGAGTGAAATTCTCTACATTATGCATTTCTGATCGACTT CCAGCACGACTTGGTATACTAGTTCCATCTGTATTGTTCGATAATGCCAAAGAATGACCT CGATCAGCTGTTAATCGTGAATGACCAAATTCATTATCAGTCCATATTGCATCAAAATCA TCACGAACAGGTGGATGTAGCGTGCCTGAACTAGCAAACAGGATAGTTGTATCTAAATCC GAAATAATTCCACTAACTGTGCTAGCAGATTGTAAACAAGCTTGTGTACCAGGACCATGA ATTTCGAGCAAGTTGATCAAGTTACGCAATTTTGAATCTAAGAATTCAGCTCGTCTGTCC AGTTCAACTATACTTTTATTACGAGTTAAAAGTAGATGTTGACCACCTGTTGTTGTTCCC GATCCATATATATCGGGACGACTTGCACTTGTAGCTTGTATTAAACTTATACACGCTGTT CCAACACCACGAACAGCTGATCTCAATTGATCCGCTTGATTGACATCGGGTAAAGTTGCA GCAGCACCTTTACAAGTTTGACACATTTCTTGGTATTCCTGTGTTAAATTATGCGCCAAT GGAGCAATCTCACCATCCGAAGCAGGTTGTCTAGCACGTAATTGAATAGCTTGATTCAAC TGATCCATATGTCGAGCGATTCTTACATACGTGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)