These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7492#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 808 fasta sequence [CCAGCTTTACGTAAACCTAGCAATTGGTCGTTGGAATTTCGTGCATTTATTGCAGCGTGTTTGGCGAAATCACCTGAAGCGCGTCCTACGGCAGCAGCTTTACTACAAACTGAATTTATCCGTAATGCAAAACCTTGTTCAATATTATTACAACTAATTAATGAAGCCAACGAAGCAAGAGAAAGACGTCTTTTACAACAACAACAACAAACATCTGCGCCTGATACACCGATTTCCGATGTTAAACGACGTCATTCAGTAATGAATAAAATTGATGAAAATCAAGCTAAATCTAAACAAAATCAATTATCTCAAGATGATGTTGATGATAATTTACACACGATGGTTCGTTCAAATTCAACATCTAATCGAACTGTGAG-CAATAATATT-AATAGTAATAATAATAATGAATCTGGTTTGGATATTGATGGTGCGGCAACTTTAGTTTCATTATGCTCAAACGAAGATCGCACAAATCA-TCATAATGATGGTGGTGATGATGATGACGATGATGACAATGGCAGTTTTATACGTCATCATGATGATGAAACAAATGTCAATAATCCTTATATATCTTCCGGTAATCTTGACACAATGGTTGTCAATGATGACGGGGAAAGTGAAGAAGATAGTGGTTCCGTCGTGGTACATGATACAACTGGTGATTCATCAGACGGATTAGATGATGCAGAACGCGATCAACGTGAAGCTTTCGAATTATTAGATGCTGCTCTGCCCCCTGCTGTGGCCACTGAAGGTACACTAACTAGAAGAATTGATAAGGCCGTAAAAATGGCCAATAATATCG] [+] EMBL CD195014 [CCAGCTTTACGTAAACCTAGCAATTGGTCGTTGGAATTTCGTGCATTTATTGCAGCGTGTTTGGCGAAATCACCTGAAGCGCGTCCTACGGCAGCAGCTTTACTACAAACTGAATTTATCCGTAATGCAAAACCTTGTTCAATATTATTACAACTAATTAATGAAGCCAACGAAGCAAGAGAAAGACGTCTTTTACAACAACAACAACAAACATCTGCGCCTGATACACCGATTTCCGATGTTAAACGACGTCATTCAGTAATGAATAAAATTGATGAAAATCAAGCTAAATCTAAACAAAATCAATTATCTCAAGATGATGTTGATGATAATTTACACACGATGGTTCGTTCAAATTCAACATCTAATCGAACTGTGAG CAATAATATT AATAGTAATAATAATAATGAATCTGGTTTGGATATTGATGGTGCGGCAACTTTAGTTTCATTATGCTCAAACGAAGATCGCACAAATCA TCATAATGATGGTGGTGATGATGATGACGATGATGAn ] [+] EMBL CD161544 [ GTTTGGCGAAATCACCTGAAGCGCGTCCTACGGCAGCAGCTTTACTACAAACTGAATTTATCCGTAATGCAAAACCTTGTTCAATATTATTACAACTAATTAATGAAGCCAACGAAGCAAGAGAAAGACGTCTTTTACAACAACAACAACAAACATCTGCGCCTGATACACCGATTTCCGATGTTAAACGACGTCATTCAGTAATGAATAAAATTGATGAAAATCAAGTTAAATCTAAACAAAATCAATTATCTCAAGATGATGTTGATGATAATTTACACACGATGGTTCGTTCAAATTCAACATCTAATCGAACTGTGAGNNCAT ATATTAAATAGT ATAANTATAATGAATCTG ] [+] EMBL CD071989 [ AATATT AATAGTAATAATAATAATGAATCTGGTTTGGATATTGATGGTGCGGCAACTTTAGTTTCATTATGCTCAAACGAAGATCGCACAAATCA TCATAATGATGGTGGTGATGATGATGACGATGATGACAATGGCAGTTTTATACGTCATCATGATGATGAAACAAATGTCAATAATCCTTATATATCTTCCGGTAATCTTGACACAATGGTTGTCAATGATGACGGGGAAAGTGAAGAAGATAGTGGTTCCGTCGTGGTACATGATACAACTGGTGATTCATCAGACGGATTAGATGATGCAGAACGCGATCAACGTGAAGCTTTCGAATTATTAGATGCTGCTCTGCCCCCTGCTGTGGCCACTGAAGGTACACTAACTAGAAGAATTGATAAGGCCGTAAAAATGGCCAATAATATCG] [-] EMBL CD157609 [ GGCAAC TTAGTTTCATTATGCTCAAACGAAGATCGCAC AATCANTCATAATGATGGTGGTGATGATGATGACGATGATGACAATGGCAGTTTTATACGTCATCATGATGATGAAACAAATGTCAATAATCCTTATATATCTTCCGGTAATCTTGACACAATGGTTGTCAATGATGACGGGGAAAGTGAAGAAGATAGTGGTTCCGTCGTGGTACATGATACAACTGGTGATTCATCAGACGGATTAGATGATGCAGAACGCGATCAACGTGAAGCATTCGAATTATTAGATGATGCTCTGC ] [-] EMBL CD069015 [ CATGATGATGAAACAAATGTCAATAATCCTTATATATCTTCCGGTAATCTTGACACAATGGTTGTCAATGATGACGGGGAAAGTGAAGAAGATAGTGGTTCCGTCGTGGTACATGATACAACTGGTGATTCATCAGACGGATTAGATGATGCAGAACGCGATCAACGTGAAGCTTTCGAATTATTAGATGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||