cluster # 7517

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Schistosoma mansoni
cluster # 7517 cluster # 7517 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7517#0 length = 536 sequences # 5

consensusID : consensus_7517#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 536
fasta sequence

                              [CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCACGGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAATCCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAGGAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT-CC-CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA]

[+] EMBL CD112464             [CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCACGGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAATCCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAGGAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAACTCTAATTC                                                                                                                                 ]
[-] EMBL CD149374             [                                                                                                                                                                                                 ACATGGTAATCAACAACATTTAAGTGCATCATCTACTTCCTNTTTGCCAAATTTTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAATCCC CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGG                           ]
[-] EMBL CD178355             [                                                                                                                                                                                                        AATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT CC CAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA]
[-] EMBL CD149358             [                                                                                                                                                                                                                                  TACTTCCTTTTTGCCAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAGATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAACAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTCATCACGACAAACAAAT CCGCAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGTTCGG                           ]
[-] EMBL CD149398             [                                                                                                                                                                                                                                                                                                                                                        CGTTATCGTAGACAAACAAAAGTTGTTTCCCCAGACAAATCAATTTGTAGTCATAATTGTAATTCTCAGTATTGTCATCACGACAAACAAATCCC CAGTACTTCCAATTCCAACAAAATGGTCAATAATAATACTGCTGTTAGTGTTGGAAATGTAAATAGT                               ]




>consensus_7517#0
CTCTAAAAGAGAGTTTTTCACGTCTAATGGGAAAATTAGATCTTATGGCTCGACGCCCAC
GGATATCAGGTAATTCAAGTATTGACAAACATCGCCATCCATCAACTCAATACAATGAAT
CCCAGTCTAATCTTTATTCATTTCTTCCGGATTTAATGGAGTCAGTTTCTGTGAAATCAG
GAACTTATTCATCACATGATAATCAACAACATTTAAGTGCATCATCTACTTCCTTTTTGC
CAAATTCTAATCAATCGAAGCAATTAGCTGTTAAATCACAAAGTTCAAGTCAATGTGAAG
ATGACAGTATGAGAAAAGAAGAAACTGTCGATGAAATGATGGAACGTTATCGTAGACAAA
CAAAAGTTGTTTCACCAGACAAATCAATTTTTAATCATAATTCTAATTCTCAGTATTCTC
ATCACGACAAACAAATCCCAGTACTTCAAATTCCAACAAAATGGTCAATAATAATACTGC
TGTTAGTGTTGGAAATGTAAATAGTTCGGACAAAAATTTCTCTTCTATCCCTTCCA

clustalw multiple alignements is not computed in this case