Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7561 cluster # 7561       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7561#0 length = 911 sequences # 5  

consensusID : consensus_7561#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 911
fasta sequence
                              [GCGTTATTCAATCCCCGTGAATCATTCGAAGATTGTTCTTCCGTCGTTGTGGATGTTTTCTTTCAGCTTTTAATTGTCTATATTTAATTGCTTCCTCTTCTAAACGTTTCCTATCCGCTTCTAATTTGTTTACATTAACTGGGCGTTTCGGTCGACTGCTACTAGAAGTCGTCGTAACTGAAAAAGATTTAGAAGTTTCATGATTTCCTTCATCAGCAAGTATATTGAATTGCTT-ATTATTCAAGTCTTCAGAGGTTGGCCTAACTTCACCAAGTTCAGTATCATGCCAACGCTTCAAACTAGTTACAGAGTCAATACGAGAAGCAGGAAGTATAGGTGGCTCACCATCATCATCATAACAATAGCCTTTGTTCATATGGTTATCATCATATGGAGCAGTAATGTCATTATTATCATCGCCGCCATCAGATTTTCCAGTACAGCCAAACTGACGGGTCTGTGGTGATGATGAATAAGTTGCATTACGTTCAGTAATTGGATCTGAATTTTCTTCAAAATCTAATGGATCATTTTCCATCTCTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCATAGTGATTTGTGGAGGTGAATGATTCATTACATCATATTCATCTAACGAATTTGTATGTGATTGTTGTTGTTGACAATCAGCTTCAAACAAATCTTCCATAGTTGGATCCATATCACTATCATCGGGTATATCAGGTTTAGTTTCAATTATACTAGGAATTGACGATACATTTTTTTGCTGAACTGATGGTTCTGATAATGATGGTAATACAGAAGAAGACGAAGATTGAAGTAATGATGAATGAAGATTTGATTGACTAGAAATAGAATTAAACGAACCTATTGGTTGTATAGAATGAGATGTAAATGAA]

[-] EMBL SMAA17934            [GCGTTATTCAATCCCCGTGAATCATTCGAAGATTGTTCTTCCGTCGTTGTGGATGTTTTC TTCAGC TTTAATTGCCAATATATAATGGCTCCCTCTTCTAAACGTTTCCTATCCGCTTCCAATTTGTTTACATTAACTGGGCGTTTCGGTCGACTGCTACTAGAAGTCGTCGTAACTGAAAAAGATTTAGAAGTTTCATGATTCCCTTCATCAGCAAGTATATTGAATTGCTTAATAATTCAAGTCTTCAGAGGTTGGCCTAACTTCACCAAGTTCAGTATCATGCCAACGCTTCAAACTAGTTACAGAGTCAATACGAGAAGCAGGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD153479             [                                                       TTTTCTTTCAGCTTTTAATTGTCTATATTTAATTGCTTCCTCTTCTAAACGTTTCCTATCCGCTTCTAATTTGTTTACATTAACTGGGCGTTTCGGTCGACTGCTACTAGAAGTCGTCGTAACTGAAAAAGATTTAGAAGTTTCATGATTTCCTTCATCAGCAAGTATATTGAATTGCTT ATTATTCAAGTCTTCAGAGGTTGGCCTAACTTCACCAAGTTCAGTATCATGCCAACGCTTCAAACTAGTTACAGAGTCAATACGAGAAGCAGGAAGTATAGGTGGCTCACCATCATCATCATAACAATAGCCTTTGTTCATATGGTTATCATCATATGGAGCAGTAATGTCATTATTATCATCGCCGCCATCAGATTTTCCAGTACAGCCAAACTGACGGGTCTGTGGTGATGATGAATAAGTTGCATTACGTTCAGTAATTGGATCTGAATTTTCTTCANAATCTAATGGATCATTTTCCATCTCTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCATAGTGATTTGTGGAGGTGAATGATTCA                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD153112             [                                                       TTTTCTTTCAGCTTTTAATTGTCTATATTTAATTGCTTCCTCTTCTAAACGTTTCCTATCCGCTTCTAATTTGTTTACATTAACTGGGCGTTTCGGTCGACTGCTACTAGAAGTCGTCGTAACTGAAAAAGATTTAGAAGTTTCATGCTTTCCTTCATCAGCAAGTATATTGAATTGCTT ATTATTCAAGTCTTCAGAGGTTGGCCTAACTTCACCAAGTTCAGTATCATGCCAACGCTTCAAACTAGTTACAGAGTCAATACGAGAAGCAGGAAGTATAGGTGGCTCACCATCATCATCATAACAATAGCCTTTGTTCATATGGTTATCATCATATGGAGCAGTAATGTCATTATTATCATCGCCGCCATCAGATTTTCCAGTACAGCCAAACTGACGGGTCTGTGGTGATGATGAATAAGTTGCATTACGTTCAGTAATTGGATCTGAATTTTCTTCAAAATCTAATGGATCATTTTCCATCTCTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCATA                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD124639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCAAAATCTAATGGATCATTTTCCATCTCTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCATAGTGATTTGTGGAGGTGAATGATTCATTACATCATATTCATCTAACGAATTTGTATGTGATTGTTGTTGTTGACAATCAGCTTCAAACAAATCTTCCATAGTTGGATCCATATCACTATCATCGGGTATATCAGGTTTAGTTTCAATTATACTAGGAATTGACGATACATTTTTTTGCTGAACTGATGGTTCTGATAATGATGGTAATACAGAAGAAGACGAAGATTGAAGTAATGATGAATGAAGATTTGATTGACTAGAAATAGAATTAAACGAACCTATTGGTTGTATAGAATGAGATGTAAATGAA]
[-] EMBL CD124637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCAAAATCTAATGGATCATTTTCCATCTCTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCATAGTGATTTGTGGAGGTGAATGATTCATTACATCATATTCATCTAACGAATTTGTATGTGATTGTTGTTGTTGACAATCAGCTTCAAACAAATCTTCCATAGTTGGATCCATATCACTATCATCGGGTATATCAGGTTTAGTTTCAATTATACTAGGAATTGACGATACATTTTTTTGCTGAACTGATGGTTCTGATAATGATGGTAATACAGAAGAAGACGAAGATTGAAGTAATGATGAATGAAGATTTGATTGACTAGAAATAGAATTAAACGAACCTATTGGTTGTATAGAATGAGATGTAAATGAA]


>consensus_7561#0 GCGTTATTCAATCCCCGTGAATCATTCGAAGATTGTTCTTCCGTCGTTGTGGATGTTTTC TTTCAGCTTTTAATTGTCTATATTTAATTGCTTCCTCTTCTAAACGTTTCCTATCCGCTT CTAATTTGTTTACATTAACTGGGCGTTTCGGTCGACTGCTACTAGAAGTCGTCGTAACTG AAAAAGATTTAGAAGTTTCATGATTTCCTTCATCAGCAAGTATATTGAATTGCTTATTAT TCAAGTCTTCAGAGGTTGGCCTAACTTCACCAAGTTCAGTATCATGCCAACGCTTCAAAC TAGTTACAGAGTCAATACGAGAAGCAGGAAGTATAGGTGGCTCACCATCATCATCATAAC AATAGCCTTTGTTCATATGGTTATCATCATATGGAGCAGTAATGTCATTATTATCATCGC CGCCATCAGATTTTCCAGTACAGCCAAACTGACGGGTCTGTGGTGATGATGAATAAGTTG CATTACGTTCAGTAATTGGATCTGAATTTTCTTCAAAATCTAATGGATCATTTTCCATCT CTTGTAATAGCAGAGATGGTTTCGATTTAAAATGTTTACTTAACTGTTGTGATACGTCCA TAGTGATTTGTGGAGGTGAATGATTCATTACATCATATTCATCTAACGAATTTGTATGTG ATTGTTGTTGTTGACAATCAGCTTCAAACAAATCTTCCATAGTTGGATCCATATCACTAT CATCGGGTATATCAGGTTTAGTTTCAATTATACTAGGAATTGACGATACATTTTTTTGCT GAACTGATGGTTCTGATAATGATGGTAATACAGAAGAAGACGAAGATTGAAGTAATGATG AATGAAGATTTGATTGACTAGAAATAGAATTAAACGAACCTATTGGTTGTATAGAATGAG ATGTAAATGAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)