Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7611 cluster # 7611       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7611#0 length = 446 sequences # 5  

consensusID : consensus_7611#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 446
fasta sequence
                              [AGTTGTCTAACATAATAATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATAATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAGACTCAGAGAAACGATGATAGAAGTGCGGTAAGAAGAGTCAGTGATTCATCATTCTCTTGGGACCGCAGCATCTT]

[+] EMBL CD091228             [AGTTGTCTAACATAATGATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATAATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAGACTCAGAGAAACGATGATAGAAGTGCGGTAAGAAGAGTCAGTGATTCATCATTCTCTTGGGACCGCAGCATCTT]
[+] EMBL CD091239             [AGTTGTCTAACATAATAATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATAATGCAAGCTCAGACTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAGTAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAGACTCAGAGAAGCGATGATAGAAGTGCGGAAAGAAGAGTCAGTGATTCATCATTCTC                  ]
[+] EMBL CD091129             [AGTTGTCTAACATAATAATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATAATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAGACTCAGAGAAACGATGATAGAAGTGCGGTAAGAAGAG                                     ]
[+] EMBL CD091249             [AGTTGTCTAACATAATAATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATAATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAAACTCAGAGAAACGATGATAGAAGTGCGG                                              ]
[-] EMBL CD091237             [                                       ACAGTTCACACTTTTGCGCGTTATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTATTATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGAGATCACTGAAGGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAATGAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTAAACGCCTTCGACTTGAGCGGTCAAATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGACACTCAGACCGAGACTCAGAGAAACGATGATAGAAGTGCGGTAAGAAGAGTCAGTGATTCATCATTCTCTTGGGACCGCAGCATC  ]


>consensus_7611#0 AGTTGTCTAACATAATAATTCCCACGCGCGCTGCTAAGAACAGTTCACACTTTTGCGCGT TATAAGTTCCGGAAAGAAATGTGCATATTTCGTTTCTGCTCTACGTAAAAACACTAGTTA TAATGCAAGCTCAGATTTGTTTTATCAAATTCATGTCACAGTCTTGTCACAGAGCATAGA GATCACTGAAAGAGAGCGGCTGCGGTAGGAATTTCAATGGACAAATCAGTCGAGAATAAT GAGAAGGGAAAAAAGACGGACAGCACCATTGCGCTGAACGCCTTCGACTTGAGCGGTCAA ATGCCTGAGCGAAAAATAACGCCATCACTGCACTTGCCCCAGTTGAGCGTGCAGCATGAC ACTCAGACCGAGACTCAGAGAAACGATGATAGAAGTGCGGTAAGAAGAGTCAGTGATTCA TCATTCTCTTGGGACCGCAGCATCTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)