Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7629 cluster # 7629       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7629#0 length = 837 sequences # 5  
consensusID : consensus_7629#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 837
fasta sequence 
                              [CTAAATACAAAGCACACCATAAATTTGTATTGGAATTCTGAAATTCTACACTCGATAAGTTAAAACTTTCATGATCTAAGTAACTAGGTCCGCCCCATGGTGGTGACATTAGAGCAGCAGTGTATCCAAGGTTGTTGGTCACACCAGACTGAGAAACGAAAATTGATTGAATCTGCTTCCATGCCCAAGTAAAATAATCTTCACAAACAAATTCAATAAGATGGCGAACGCCATAAATTTCAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGATCACTCGAAATCCACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTGTGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGATATATACGTTTGGCCTGGTGAGCAGCAATTACTTCAGGAGTAGCACTGAATAATGAATCACAATCAACTTGAATCCCAGAATCAAAACGAGAGAATAGACGAAATCTTTGAGCCCAATATTTATCCATTGAAGGGTCAAAGTCATTGCACACCAGCTGATTGGACTCACATGCTAACTTAGGTACAGGTGGATTATAACGCCAAAAGAAGCGGCAGTTGTATAAAAGGGCCTCTAAGTTGAATGTGGGTGAATTCCAGCAACGAGGTAGGTTCAGTTTCCATGCATTGAGTACACGGTAACTATTATTGTCATTATGGTCACTGGTAAACATGCAAACCATCTCCAGTACATAACACATTCTTGAAAAAACTGAAGCTGCACAAATGTATGGATCGACCAAACTTTNTAATTCTCCAGATGAACTCATAAGTAATGATCCAG]

[+] EMBL CD090961             [CTAAATACAAAGCACACCATAAATTTGTATTGGAATTCTGAAATTCTACACTCGATAAGTTAAAACTTTCATGATCTAAGTAACTAGGTCCGCCCCATGGTGGTGACATTAGAGCAGCAGTGTATCCAAGGTTGTTGGTCACACCAGACTGAGAAACGAAAATTGATTGAATCTGCTTCCATGCCCAAGTAAAATAATCTTCACAAACAAATTCAATAAGATGGCGAACGCCATAAATTTCAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGATCACTCGAAATCAACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTGTGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD170974             [ TAAATACAAAGCACACCATAAATTTGTATTGGAATTCTGAAATTCTATACTCGATAAGTTAAAACTTTCATGATCTAAGTAACTAGGTCCGCCCCATGGTGGTGACATTAGAGCAGCAGTGTATCCAAGGTTGTTGGTCACACCAGACTGAGAAACGAAAATTGATTGAATCTGCTTCCATGCCCAAGTAAAATAATCTTCACAAACAAATTCAATAAGATGGCGAACGCCATAAATTTCAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGATCACTCGAAATCCACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTGTGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD184718             [                                                                                                                                                                  TTGATTGAATCTGCTTCCATGCCCAAGTAAAATAATCTTCACAAACAAATCCAATAAGATGGCGAACGCCATAAATTTCAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGATCACTCGAAATCCACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTGTGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGATATATACGTTTGGCCTGGTGAGCAGCAATTACTTCAGGAGTAGCACTGAATAATGAATCACAATCAACTTGAATCCCAGAATCAAAACGAGAGAATAGACGAAATCTTTGAGCCCAATATTTATCCATTGAAGGGTCAAAGTCATTGCACACCAGCTGATTGGACTCACATGCTAACTTAGGTACAGGTGGATTATAACG                                                                                                                                                                                                                                                  ]
[+] EMBL CD122113             [                                                                                                                                                                                          AAGTAAAATAATCTTCACAAACAAATTCAATAAGATGGCGAACGCCATAAATTTCAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGGTCACTCGAAATCCACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTGTGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGATATATACGTTTGGCCTGGTGAGCAGCAATTACTTCAGGAGTAGCACTGAATAATGAATCACAATCAACTTGAATCCCAGAATCAAAACGAGAGAATAGACGAAATCTTTGAGCCCAATATTTATCCATTGAAGGGTCAAAGTCATTGCACACCAGCTGATTGGACTCACATGCTAACTTAGGTACAGGTGGATTATAACGCCAAAAGAAGCGGCAGTTGTATAAAAGGGCCTCTAAGTTGAATGTGGGTGAATTCCAGCAACGAGGTAGGTTCAGTTTCCATGCATTGAGTACACGGTAACTATTATTGTCATTATGGTCACTGGTAAACATGCAAACCATCTCCAGTACATAACACATTCTTGAAAAAACTGAAGCTGCACAAATGTATGGATCGACCAAACTTTNTAATTCTCCAGATGAACTCATAAGTAATGATCCAG]
[+] EMBL CD152710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTTGCATGCATTGAGTACACGGTAACTATTATTGTCATTATGGTCACTGGTAAACGTGCGAACCATCTCCAGTACATAACACATTCTTGAAAAAACTGAAGCTGCACAAATGTATGGATCGACCAAACTT                                     ]




>consensus_7629#0
CTAAATACAAAGCACACCATAAATTTGTATTGGAATTCTGAAATTCTACACTCGATAAGT
TAAAACTTTCATGATCTAAGTAACTAGGTCCGCCCCATGGTGGTGACATTAGAGCAGCAG
TGTATCCAAGGTTGTTGGTCACACCAGACTGAGAAACGAAAATTGATTGAATCTGCTTCC
ATGCCCAAGTAAAATAATCTTCACAAACAAATTCAATAAGATGGCGAACGCCATAAATTT
CAGCATTATTTGAAGCCATTGAAATACGAATGGGATCCGATTCAATTGCGATCACTCGAA
ATCCACGTAACGCGAATTGTATAGCATTTGATCCAGTACCACAGAAAATATCCAAGACTG
TGTAACTTCCTTTTGTCGAAGGTGTAAAAACTCGATATATACGTTTGGCCTGGTGAGCAG
CAATTACTTCAGGAGTAGCACTGAATAATGAATCACAATCAACTTGAATCCCAGAATCAA
AACGAGAGAATAGACGAAATCTTTGAGCCCAATATTTATCCATTGAAGGGTCAAAGTCAT
TGCACACCAGCTGATTGGACTCACATGCTAACTTAGGTACAGGTGGATTATAACGCCAAA
AGAAGCGGCAGTTGTATAAAAGGGCCTCTAAGTTGAATGTGGGTGAATTCCAGCAACGAG
GTAGGTTCAGTTTCCATGCATTGAGTACACGGTAACTATTATTGTCATTATGGTCACTGG
TAAACATGCAAACCATCTCCAGTACATAACACATTCTTGAAAAAACTGAAGCTGCACAAA
TGTATGGATCGACCAAACTTTNTAATTCTCCAGATGAACTCATAAGTAATGATCCAG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)