These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 526 fasta sequence [TTACTATTTATTTATGAAAGANACACTACTGAAACTTTACGAAATTATGAACATAAAACATCAAGGAGTTCATCAGTATTTAGTTGTCCATCTCCGTCTTTGTCGTGCTGCTTGATAAACTTCTCAACTTGTTCTTTTTTGAATGGACCTCAGTGTATGTAAATAAACTCCCAGCTCCACGTGAAGTATCACCACTCATACGAACAACACGTTGGGGATTGTTAGCTGCTGGGATTGTTTATGGAGCTCTACGCCTAAAATATCTTACCAAAAGGGAAAAG-A-GATTACCGAGCGTGACCGTGCAATT-ATAGAAAAAAGATTGGAGGAGTACAATG-AATTGCATGCTTTACAGGCACAAAAATCTTTGGAAGAGTTATCTAAAGCAACTGGTGTACCATTG-AATCAGTAGATAACATAATAAACTGTAGAGACTACCGTAACGTATATCACTTCCAACTTTTTAGATATATAATCAGTCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AA999584 [TTACTATTTATTTATGAAAGANACACTACTGAAACTTTACGAAATTATGAACATAAAACATCAAGGAGTTCATCAGTATTTAGTTGTCCATCTCCGTCTTTGTCGTGCTGCTTGATAAACTTCTCAACTTGTTCTTTTTTGAATGGACCTCAGTGTATGTAAATAAACTCCCAGCTCCACGTGAAGTATCACCACTCATACGAACAACACGTTGGGGATTGTTAGCTGCTGGGATTGTTTATGGAGCTCTACGCCTAAAATATCTTACCAAAAGGGAAAAG A GATTACCGAGCGTGACCGTGCAATT ATAGAAAAAAGATTGGAGGAGTACAATG AATTGCATGCTTTACAGGCAC AAAATCTTTGGAAGAGTTATCTAAAGCAACTGGGGTACCATTG AATCAGTAGATAACATAATAACCTGTAGAGCCTACC ] [-] EMBL AI395731 [ gGTGTATGAATATAAACTCCCAGCCCCACGTGAAGTATCACCACTCATACGAACAGCACGTTGGGGATTGTTAGCTGCTGGGCTTGTTTATGGCCCTGTACGCCTAAAATATCTTACCAAAAGGGAAAAG ACGATTACCGAGCGTGACCGTGCAATT TTGGAAAAAAGATTGGAGGGGTACAATG AATTGCATGCTTAACAGGCACAAAAATCTTTGGAAGAGTTATCTAAAGCAACTGGTGTACCATTG AATCAGTAGATAACATAATAAACTGTAGAGACCACTGTAACGTATATCATTTCCAACTTTTTGGATATATAATCAGTCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AA559594 [ GCTCCACGTGAAGTATCACCACTCATACGAACAACACGTTGGGGATTGTTAGCTGCTGGGATTGTTTATGGAGCTCTACGCCTAAAATATCTTACCAAAAGGGAAAAGAA GATTACCGAGCGTGACCGTGCAATTNTTTNTTTTTNNATTGGAGGAGTACAATG AATTGCATGCTTTACAGGCACAAAAATCTTTGGAANAGTTATCTAAAGCAACTGGTGTACCATTG AANCAGTAGATAACATAATAAACTGTAGAGACTACCGTAACGTNTATCACTNCCNACTTTTTAGATAT ] [-] EMBL AA999526 [ AATT ATAGAAAAAAGATTGGAGGAGTACAATG AATTGCATGCTTTACAGGCACAAAAATCTTTGGAAGAGTTATCTAAAGCAACTGGTGTACCATTG AATCAGTAGATAACATAATAAACTGTAGAGACTACCGTAACGTATATCACTTCCAACTTTTTAGATATATAA ] [+] EMBL AA559700 [ gtGGTGTACAATGAAATTGCATGCTTTACAGGCACAAAAATCTTTGGAAGTGTTATCTAAAGCAACTGGTGTACCATTGAAATCAGTAGATAACATAATAAACTGTAGAGACTACCGTAACGTATATCACTTCCAACTTTTTAGATATATA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||