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Schistosoma mansoni
cluster # 7663 cluster # 7663       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7663#0 length = 1332 sequences # 5  

consensusID : consensus_7663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1332
fasta sequence
                              [ACTCTGTGAAATCCTCCACGTAACTGGTGTTGGGATTCGTACGATCTGCTGACTTCACAAATCCTGTGATAGAACAGGTAGTTCCAGACTCATACAGTTGTTGAGGTGAACAAGGTTTATTATTAGTGTTTGCAACATTTCGATGTAATGAAGTTGGAGGAAAAGAATTGGGAGACATTAACCAAGACTTAGATGTCGCAGACTGATTCCCAGTATTGACGATCAACCCATTGGGTGTGAAATGTGGATCCACACAATCTGATGTGACAGACTTTTGGTTTGATGCACGATGGTCATACGACCATTTCAGCTGAGGTAGAGACTTTGAGAATGATGAAATTTCGTCATGAGGGATTTGATAGTTACTTGTTATCCCGAGATAGGCAGCGCAAGGTTGAACGAAAGACCAGTCTTGAGATTCCATGCTGACGCTACCGAGGTTTTGAATGCATGGCAGTTTAGCAAGATGCCATAACCCTTGATTTTGACAAGATGATGGTGAATTGACAGACTGGAACGGTACAGGAATCGAATGTGACGATGTGTCTGTTACGCTGGAAGATAATGAGTCCTGGATTGTTTGAACAGACGGAGAGCCCGGCCCANGAGTGCTTACTGAAGTTGTTGAAGGGTTCATACGGTTGGTGGACACTGAGACACCATCAACAGGACTAGGTTGAGGTGCGTCATGGGATGGTGGTG-TGGGAAGCATTAAAGCTAGTTCTGCTGGTCCGATCGGTCCAAACCCTGTACTGCTAGCAAGACTGACTCCTCTGTGAGTGATCAGTCCAACGTTGCGACTGAAAGTGCCACTTGAATTATTCATGATGGAACCATTAGAATGCATCAATCCAGAATGAATATTTGTTTCCAATCCTCCCGGATTAATGTGTTGGTCATCAATTAAACCATTGCATTCTGTGACTCCGACTTTCATATCCGGGGAATATGAATTGGCCGAAGTGAAGTTGACATTTGTGATATCTGTCGTGATTCCTTGTGCGCCATCATTCANACTGCATTCGTTGAAATCAGCGCGGGCAATAGCAGTACGATGGCGTTTGTTTCTAAACGAATACTCGTCAGTAGTTACATTATTTTCTTTGTATAATGTATTGTCTTCGACAATACTATAATTAGGGAAGGACGGGGATGATTGCTCAATGGCAGACTGTAAAGTAATGCCTTCTGGGCATATATACTGCTCTCTTTCAATTCGATCTGGAATGTTGAGACATAAGTTTGGACGCTTTATATCATTAGACGATTCTTTCTGTAATTCCTGGGCTGCATGTCTGGCTAACCAAGTATTGAATAAATTCCTTTTCATTA]

[+] EMBL CD127806             [ACTCTGTGAAATCCTCCACGTAACTGGTGTTGGGATTCGTACGATCTGCTGACTTCACAAATCCTGTGATAGAACAGGTAGTTCCAGACTCATACAGTTGTTGAGGTGAACAAGGTTTATTATTAGTGTTTGCAACATTTCGATGTAATGAAGTTGGAGGAAAAGAATTGGGAGACATTAACCAAGACTTAGATGTCGCAGACTGATTCCCAGTATTGACGATCAACCCATTGGGTGTGAAATGTGGATCCACACAATCTGATGTGACAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD118448             [             CTCCACGTAACTGGTGTTGGGATTCGTACGATCTGCTGACTTCACAAATCCTGTGATAGAATAGGTAGTTCCAGACTCATTCAGTTGTTGAGGTGAACAAGGTTTATTATTAGTGTTTGCAACATTTCGATGTAATGAAGTTGGAGGAAAAGAATTGGGAGACATTAACCAAGACTTAGATGTCGCAGACTGATTCCCAGTATTGACGATCAACCCATTGGGTGTGAAATGTGGATCCACACAATCTGATGTGACAGACTTTTGGTTTGATGCACGATGGTCATACGACCATTTCAGCTGAGGTAGAGACTTTGAGAATGATGAAATTTCGTCATGAGGGATTTGATAGTTACTTGTTATCCCGAGATAGGCAGCGCAAGGTTGAACGAAAGACCAGTCTTGAGATTCCATGCTGACGCTACCGAGGTTTTGAATGCATGGCAGTTTAGCAAGATGCCATAACCCTTGATTTTGACAAGATGATGGTGAATTGACAGACTGGAACGGTACAGGAATCGAATGTGACGATGTGTCTGTTACGCTGGAAGATAATGAGTCCTGGATTGTTTGAACAGACGGAGAGCCCGGCCCANGAGTGCTTACTGAAGTTGTTGAAGGGTTCATACGGGTGGTGGACACTGAGACACCATCAACAGGACTAGGTTGAGGTGCGTCATGGGATGGTGGTGNTGGGAAGCATTAAAGCTAGTTCTGCTGGTCCGATCGGTCCAAACCCTGTACTGCTAGNCAGACTGACTCCTCTGTGAATGATCAGTCCCACGTTGCGACTGGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD115351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCATAATCCTTGATTTTGACAAGATGATGGTGAATTGACAGACTGGAACGGTACAGGAATCGAATGTGACGATGTGTCTGTTACGCTGGAAGATAATGAGTCCTGGATTGTTTGAACAGACGGAGAGCCCGGCCCAGGAGTGCTTACTGAAGTTGTTGAAGGGTTCATACGGTTGGTGGACACTGAGACACCATCAACAGGACTAGGTTGAGGTGCGTCATGGGATGGTGGTG TGGGAAGCATTAAAGCTAGTTCTGCTGGTCCGATCGGTCCAGAACCTGTACTGCTAGCAAGACTGACTCCTCTGTGAGTGATCAGTCCAACGTTGCGACTGAAAGTGCCACTTGAATTATTCATGATGGAACCATTAGAATGCATCAATCCAGAATGAATATTTGTTTCCAATCCTCCCGGATTAATGTGTTGGTCATCAATTAAACCATTGCATTCTGTGACTCCGACTTTCATATCCGGGGAATATGAATTGGCCGAAGTGAAGTTGACATTTGTGATATCTGTCGTGATTCCTTGTGCGCCATCATTCANACTGCATTCGTTGAAATCAGCGCGGGCAATAGCAGTACGATGGC                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD098081             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGGTTCATACGGTTGGTGGACACTGAGACACCATCAACAGGACTAGGTTGAGGTGCGTCATGGGATGGTGGTG TGGGAAGCATTAAAGCTAGTTCTGCTGGTCCGATCGGTCCAGAACCTGTACTGCTAGCAAGACTGACTCCTCTGTGAGTGATCAGTCCAACGTTGCGACTGAAAGTGCCACTTGAATTATTCATGATGGAACCATTAGAATGCATCTATCCAGAATGAATATTTGTTTCCAATCCTCCCGGATTAATGTGTTGGTCATCAATTAAACCATTGCATTCTGTGACTCCGACTTTCATATCCGGGGAATATGAATTGGCCGAAGTGAAGTTG                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD115395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      agAACCCTGTACTGCTAGCAAGACTGACTCCTCTGTGAGTGATCAGTCCAACGTTGCGACTGAAAGTGCCACTTGAATTATTCATGATGGAACCATTAGAATGCATCAATCCAGAATGAATATTTGTTTCCAATCCTCCCGGATTAATGTGTTGGTCATCAATTAAACCATTGCATTCTGTGACTCCGACTTTCATATCCGGGGAATATGAATTGGCCGAAGTGAAGTTGACATTTGTGATATCTGTCGTGATTCCTTGTGCGCCATCATTCAAACTGCATTCGTTGAAATCAGTGCGGCAAATAGCAGTGCGAGGGCGTTTGTTTCTAAACGAATACTCGTCAGTAGTTACATTATTTTCTTTGTATAATGTATTGTCTTCGACAATACTATAATTAGGGAAGGACGGGGATGATTGCTCAATGGCAGACTGTAAAGTAATGCCTTCTGGGCATATATACTGCTCTCTTTCAATTCGATCTGGAATGTTGAGACATAAGTTTGGACGCTTTATATCATTAGACGATTCTTTCTGTAATTCCTGGGCTGCATGTCTGGCTAACCAAGTATTGAATAAATTCCTTTTCATTA]


>consensus_7663#0 ACTCTGTGAAATCCTCCACGTAACTGGTGTTGGGATTCGTACGATCTGCTGACTTCACAA ATCCTGTGATAGAACAGGTAGTTCCAGACTCATACAGTTGTTGAGGTGAACAAGGTTTAT TATTAGTGTTTGCAACATTTCGATGTAATGAAGTTGGAGGAAAAGAATTGGGAGACATTA ACCAAGACTTAGATGTCGCAGACTGATTCCCAGTATTGACGATCAACCCATTGGGTGTGA AATGTGGATCCACACAATCTGATGTGACAGACTTTTGGTTTGATGCACGATGGTCATACG ACCATTTCAGCTGAGGTAGAGACTTTGAGAATGATGAAATTTCGTCATGAGGGATTTGAT AGTTACTTGTTATCCCGAGATAGGCAGCGCAAGGTTGAACGAAAGACCAGTCTTGAGATT CCATGCTGACGCTACCGAGGTTTTGAATGCATGGCAGTTTAGCAAGATGCCATAACCCTT GATTTTGACAAGATGATGGTGAATTGACAGACTGGAACGGTACAGGAATCGAATGTGACG ATGTGTCTGTTACGCTGGAAGATAATGAGTCCTGGATTGTTTGAACAGACGGAGAGCCCG GCCCANGAGTGCTTACTGAAGTTGTTGAAGGGTTCATACGGTTGGTGGACACTGAGACAC CATCAACAGGACTAGGTTGAGGTGCGTCATGGGATGGTGGTGTGGGAAGCATTAAAGCTA GTTCTGCTGGTCCGATCGGTCCAAACCCTGTACTGCTAGCAAGACTGACTCCTCTGTGAG TGATCAGTCCAACGTTGCGACTGAAAGTGCCACTTGAATTATTCATGATGGAACCATTAG AATGCATCAATCCAGAATGAATATTTGTTTCCAATCCTCCCGGATTAATGTGTTGGTCAT CAATTAAACCATTGCATTCTGTGACTCCGACTTTCATATCCGGGGAATATGAATTGGCCG AAGTGAAGTTGACATTTGTGATATCTGTCGTGATTCCTTGTGCGCCATCATTCANACTGC ATTCGTTGAAATCAGCGCGGGCAATAGCAGTACGATGGCGTTTGTTTCTAAACGAATACT CGTCAGTAGTTACATTATTTTCTTTGTATAATGTATTGTCTTCGACAATACTATAATTAG GGAAGGACGGGGATGATTGCTCAATGGCAGACTGTAAAGTAATGCCTTCTGGGCATATAT ACTGCTCTCTTTCAATTCGATCTGGAATGTTGAGACATAAGTTTGGACGCTTTATATCAT TAGACGATTCTTTCTGTAATTCCTGGGCTGCATGTCTGGCTAACCAAGTATTGAATAAAT TCCTTTTCATTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)